Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 AC116050.2-201ENST00000612102 1779 ntBASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 POM121L13P-201ENST00000422362 380 ntBASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 AC138932.1-201ENST00000534164 6830 ntBASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPDYE4A6NLX3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 AC073912.3-201ENST00000624414 853 ntBASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.71■■□□□ 1.07
SPDYE4A6NLX3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.7■■□□□ 1.07
SPDYE4A6NLX3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SPDYE4A6NLX3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 AC005332.7-201ENST00000614046 2005 ntBASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 Z99916.2-201ENST00000604037 246 ntBASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 AC103798.2-201ENST00000624292 632 ntBASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.69■■□□□ 1.06
SPDYE4A6NLX3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 PCDHB18P-201ENST00000524813 2368 ntBASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 ECEL1P3-201ENST00000427961 737 ntBASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SPDYE4A6NLX3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms