Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 DUX4L2-201ENST00000561772 1275 ntBASIC13.76□□□□□ -0.21
LINC01549A6NIU2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 GRAMD4P7-201ENST00000578182 1232 ntBASIC13.76□□□□□ -0.21
LINC01549A6NIU2 MIR4767-201ENST00000582827 78 ntBASIC13.76□□□□□ -0.21
LINC01549A6NIU2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 DUX4L6-201ENST00000626483 1275 ntBASIC13.76□□□□□ -0.21
LINC01549A6NIU2 DUX4L1-201ENST00000627662 1275 ntBASIC13.76□□□□□ -0.21
LINC01549A6NIU2 DUX4L8-201ENST00000629013 1275 ntBASIC13.76□□□□□ -0.21
LINC01549A6NIU2 DUX4L3-201ENST00000630187 1275 ntBASIC13.76□□□□□ -0.21
LINC01549A6NIU2 DUX4L7-201ENST00000630678 1275 ntBASIC13.76□□□□□ -0.21
LINC01549A6NIU2 DUX4L5-201ENST00000630834 1275 ntBASIC13.76□□□□□ -0.21
LINC01549A6NIU2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 AL354751.1-201ENST00000412768 1863 ntBASIC13.76□□□□□ -0.21
LINC01549A6NIU2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC01549A6NIU2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 TSPY26P-201ENST00000476365 1326 ntBASIC13.75□□□□□ -0.21
LINC01549A6NIU2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 PHGDH-210ENST00000641115 1638 ntBASIC13.75□□□□□ -0.21
LINC01549A6NIU2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01549A6NIU2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 WIZP1-201ENST00000531444 2299 ntBASIC13.74□□□□□ -0.21
LINC01549A6NIU2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 GRAMD4P2-201ENST00000423297 1097 ntBASIC13.74□□□□□ -0.21
LINC01549A6NIU2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 AC012414.1-201ENST00000556676 535 ntBASIC13.74□□□□□ -0.21
LINC01549A6NIU2 SLC7A5P1-201ENST00000568957 537 ntBASIC13.74□□□□□ -0.21
LINC01549A6NIU2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LINC01549A6NIU2 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms