Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 CLDN5-201ENST00000403084 2357 ntBASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
MBD3L4A6NDZ8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
MBD3L4A6NDZ8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
MBD3L4A6NDZ8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.02■□□□□ 0.31
MBD3L4A6NDZ8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.02■□□□□ 0.31
MBD3L4A6NDZ8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
MBD3L4A6NDZ8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 AK4P3-201ENST00000418260 669 ntBASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
MBD3L4A6NDZ8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 AC117947.1-201ENST00000427448 529 ntBASIC17■□□□□ 0.31
MBD3L4A6NDZ8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 NTF6B-201ENST00000591913 560 ntBASIC17■□□□□ 0.31
MBD3L4A6NDZ8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17■□□□□ 0.31
MBD3L4A6NDZ8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 AC063952.2-201ENST00000498792 1227 ntBASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 AP003041.3-201ENST00000527151 707 ntBASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 LINC01238-205ENST00000567549 1107 ntBASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 WWOX-216ENST00000569818 525 ntBASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 AC141257.4-201ENST00000634557 245 ntBASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 AC136944.6-201ENST00000634818 245 ntBASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 LINC01521-201ENST00000504184 1943 ntBASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
MBD3L4A6NDZ8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms