Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF103-CHMP3A0A140T963 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 AL032819.2-201ENST00000624543 2162 ntBASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF103-CHMP3A0A140T963 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 MIR663A-201ENST00000385250 93 ntBASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 AL137784.2-201ENST00000607332 1000 ntBASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF103-CHMP3A0A140T963 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 AL138781.2-201ENST00000617896 1843 ntBASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 PHGDH-210ENST00000641115 1638 ntBASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 MKRN4P-201ENST00000444706 1521 ntBASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 CDCA4P2-201ENST00000441182 718 ntBASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 AC105036.2-201ENST00000569468 176 ntBASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 AL050303.2-201ENST00000619798 666 ntBASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF103-CHMP3A0A140T963 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF103-CHMP3A0A140T963 AF201337.1-201ENST00000520239 748 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms