Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
IGKV3D-20A0A0C4DH25 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
IGKV3D-20A0A0C4DH25 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.39□□□□□ -0.11
IGKV3D-20A0A0C4DH25 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.39□□□□□ -0.11
IGKV3D-20A0A0C4DH25 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGKV3D-20A0A0C4DH25 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IGKV3D-20A0A0C4DH25 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IGKV3D-20A0A0C4DH25 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
IGKV3D-20A0A0C4DH25 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
IGKV3D-20A0A0C4DH25 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.39□□□□□ -0.11
IGKV3D-20A0A0C4DH25 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
IGKV3D-20A0A0C4DH25 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.39□□□□□ -0.11
IGKV3D-20A0A0C4DH25 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
IGKV3D-20A0A0C4DH25 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 AC034268.1-201ENST00000441047 882 ntBASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 DUX4L16-201ENST00000555130 1264 ntBASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 C2orf69P4-201ENST00000565394 541 ntBASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 AC006333.2-201ENST00000607957 2099 ntBASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 AC018553.1-201ENST00000616682 1458 ntBASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.38□□□□□ -0.11
IGKV3D-20A0A0C4DH25 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 TEX21P-204ENST00000641479 1693 ntBASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 AC141586.3-201ENST00000562166 1838 ntBASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 AC137761.2-201ENST00000561729 223 ntBASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 AC145350.3-201ENST00000569033 163 ntBASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
IGKV3D-20A0A0C4DH25 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms