Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 FAM197Y1-201ENST00000421178 764 ntBASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAV25A0A0B4J276 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 AC112907.3-201ENST00000577781 2400 ntBASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 HCG11-201ENST00000411553 5696 ntBASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 PTPA-216ENST00000432651 857 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 NUDT16P1-203ENST00000513809 620 ntBASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 FSCN1P1-201ENST00000568912 1481 ntBASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV25A0A0B4J276 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 AC004980.1-204ENST00000429707 299 ntBASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 AC026471.5-201ENST00000615068 467 ntBASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 ZNF815P-204ENST00000434898 1737 ntBASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV25A0A0B4J276 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 SNORA78-201ENST00000459373 127 ntBASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV25A0A0B4J276 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms