Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 FZD10-202ENST00000539839 3282 ntBASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 AC069152.1-201ENST00000438030 544 ntBASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 AC005082.1-201ENST00000413042 2259 ntBASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV4A0A0B4J268 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 AC083880.1-201ENST00000608266 535 ntBASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV4A0A0B4J268 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 AC090192.1-201ENST00000517740 490 ntBASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 AC098934.4-201ENST00000564127 592 ntBASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 AC142086.2-201ENST00000569753 217 ntBASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 AC104771.1-201ENST00000603335 964 ntBASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 Z82202.1-201ENST00000623446 1880 ntBASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV4A0A0B4J268 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 AC124283.5-201ENST00000624661 1809 ntBASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 AP006587.1-201ENST00000534129 1502 ntBASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV4A0A0B4J268 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms