Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 AL359697.1-201ENST00000624879 587 ntBASIC5.19□□□□□ -1.58
DTX3Q8N9I9 PISRT1-201ENST00000626175 531 ntBASIC5.19□□□□□ -1.58
DTX3Q8N9I9 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
DTX3Q8N9I9 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
DTX3Q8N9I9 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
DTX3Q8N9I9 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
DTX3Q8N9I9 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
DTX3Q8N9I9 AC092326.2-201ENST00000624772 1561 ntBASIC5.19□□□□□ -1.58
DTX3Q8N9I9 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
DTX3Q8N9I9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
DTX3Q8N9I9 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
DTX3Q8N9I9 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
DTX3Q8N9I9 RPS4XP5-202ENST00000449995 1334 ntBASIC5.19□□□□□ -1.58
DTX3Q8N9I9 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.19□□□□□ -1.58
DTX3Q8N9I9 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
DTX3Q8N9I9 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
DTX3Q8N9I9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 SOCS5P3-201ENST00000425115 1576 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 RLIMP2-201ENST00000427891 1563 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 Y_RNA.160-201ENST00000363677 92 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 RNU6-777P-201ENST00000364265 104 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 MIR137-201ENST00000385223 102 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 RNA5SP296-201ENST00000410523 111 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AC245096.1-201ENST00000413104 546 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 SPA17P1-201ENST00000416656 452 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 RPS3AP9-201ENST00000417027 792 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 RPL21P111-201ENST00000418453 477 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AC007394.1-201ENST00000421941 531 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 USP9YP36-201ENST00000424581 829 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AC127526.2-201ENST00000426436 775 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 NANOGP6-201ENST00000429190 847 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 RN7SL369P-201ENST00000477138 299 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AC022447.3-201ENST00000506865 495 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 IGLVIV-64-201ENST00000518581 301 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AP003467.2-201ENST00000520175 319 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 MTND1P35-201ENST00000526739 508 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AP004609.2-201ENST00000532177 190 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AP001858.2-201ENST00000536213 601 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AL121594.2-201ENST00000541658 472 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AP005119.2-201ENST00000579735 1105 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AC079315.1-201ENST00000602952 623 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 SMIM12P1-201ENST00000603004 274 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AC012368.3-201ENST00000604190 219 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AC007363.1-201ENST00000604736 620 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AL133481.2-203ENST00000607558 139 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AL122023.1-201ENST00000622847 530 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 MTND5P17-201ENST00000418405 1603 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.18□□□□□ -1.58
DTX3Q8N9I9 SAMMSON-213ENST00000641336 1521 ntBASIC5.18□□□□□ -1.58
DTX3Q8N9I9 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 Y_RNA.1-201ENST00000352915 104 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 RN7SKP128-201ENST00000364270 303 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 RNU6-877P-201ENST00000383868 107 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 MT-TD-201ENST00000387419 68 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.17□□□□□ -1.58
DTX3Q8N9I9 MIR1305-201ENST00000408300 86 ntBASIC5.17□□□□□ -1.58
DTX3Q8N9I9 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms