Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU1-84P-201ENST00000365447 164 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 RN7SKP108-201ENST00000411367 328 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 RPL23AP4-201ENST00000427757 463 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 RPL31P50-201ENST00000471002 296 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 OR51A1P-201ENST00000511110 946 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 RNA5SP92-201ENST00000516437 110 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 SCARNA24.1-201ENST00000516465 137 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 RNU6-635P-201ENST00000516651 102 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 RNU6-1088P-201ENST00000516850 104 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 MTCO3P23-201ENST00000561363 289 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AC026898.1-201ENST00000586404 571 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AC011500.1-201ENST00000601963 469 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AC007546.1-201ENST00000619452 559 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 AC010168.2-201ENST00000562691 5428 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 THUMPD3P1-201ENST00000506556 1480 ntBASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
LYSMD3Q7Z3D4 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
LYSMD3Q7Z3D4 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
LYSMD3Q7Z3D4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.52□□□□□ -1.36
LYSMD3Q7Z3D4 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AL049641.1-201ENST00000441055 1948 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AC006213.6-201ENST00000623722 4179 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 CAP1P2-201ENST00000417455 1409 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 WDR95P-201ENST00000425638 1542 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AC005332.9-201ENST00000620266 2921 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 EFTUD1P2-201ENST00000514817 1603 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 RNU4-66P-201ENST00000365199 138 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 RN7SKP187-201ENST00000365536 330 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 RNU6-38P-201ENST00000384085 107 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 RNU6-1151P-201ENST00000384684 107 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 MIR320B1-201ENST00000390209 79 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AL133260.1-201ENST00000405720 405 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AL034374.1-201ENST00000406329 351 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 RPL31P52-201ENST00000407532 367 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AL023284.3-201ENST00000407767 334 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AL645939.3-201ENST00000435408 225 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AC245291.3-201ENST00000443400 292 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AC073909.1-201ENST00000447112 999 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 RPL12P25-201ENST00000455592 494 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 RNU6-333P-201ENST00000459117 107 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 RPS15AP17-201ENST00000470598 390 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 TMEM251P1-201ENST00000503717 318 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AC004062.1-201ENST00000509926 645 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 SNORA25.10-201ENST00000515926 124 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 RNU6-273P-201ENST00000516937 96 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 COX6CP8-201ENST00000522620 226 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AC090751.1-201ENST00000566966 267 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 MIR5690-201ENST00000583739 73 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 PRR13P7-201ENST00000605538 430 ntBASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LYSMD3Q7Z3D4 AL352984.2-201ENST00000611153 546 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms