Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TPM1P09493 RN7SKP278-201ENST00000410504 342 ntBASIC4.27□□□□□ -1.73
TPM1P09493 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.27□□□□□ -1.73
TPM1P09493 RPL23AP38-201ENST00000423801 469 ntBASIC4.27□□□□□ -1.73
TPM1P09493 NANOGP10-201ENST00000453325 895 ntBASIC4.27□□□□□ -1.73
TPM1P09493 RPL21P11-201ENST00000461458 483 ntBASIC4.27□□□□□ -1.73
TPM1P09493 RPL7P48-201ENST00000461513 746 ntBASIC4.27□□□□□ -1.73
TPM1P09493 CDH12P2-201ENST00000504393 298 ntBASIC4.27□□□□□ -1.73
TPM1P09493 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.27□□□□□ -1.73
TPM1P09493 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.27□□□□□ -1.73
TPM1P09493 RNA5SP309-201ENST00000516670 106 ntBASIC4.27□□□□□ -1.73
TPM1P09493 RN7SKP209-201ENST00000516888 304 ntBASIC4.27□□□□□ -1.73
TPM1P09493 SEC11B-201ENST00000518383 499 ntBASIC4.27□□□□□ -1.73
TPM1P09493 SUMO2P20-201ENST00000520803 283 ntBASIC4.27□□□□□ -1.73
TPM1P09493 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.27□□□□□ -1.73
TPM1P09493 AC008083.2-201ENST00000546707 476 ntBASIC4.27□□□□□ -1.73
TPM1P09493 AL121576.1-201ENST00000556055 276 ntBASIC4.27□□□□□ -1.73
TPM1P09493 RN7SL753P-201ENST00000581238 290 ntBASIC4.27□□□□□ -1.73
TPM1P09493 NF1P5-201ENST00000588287 448 ntBASIC4.27□□□□□ -1.73
TPM1P09493 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.27□□□□□ -1.73
TPM1P09493 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.27□□□□□ -1.73
TPM1P09493 AL355816.1-201ENST00000607951 118 ntBASIC4.27□□□□□ -1.73
TPM1P09493 AC100827.5-201ENST00000615883 426 ntBASIC4.27□□□□□ -1.73
TPM1P09493 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TPM1P09493 RNF6P1-201ENST00000444889 1784 ntBASIC4.27□□□□□ -1.73
TPM1P09493 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TPM1P09493 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
TPM1P09493 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TPM1P09493 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.26□□□□□ -1.73
TPM1P09493 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TPM1P09493 RNA5SP399-201ENST00000364003 117 ntBASIC4.26□□□□□ -1.73
TPM1P09493 RNA5SP505-201ENST00000364748 108 ntBASIC4.26□□□□□ -1.73
TPM1P09493 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TPM1P09493 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TPM1P09493 RN7SKP285-201ENST00000410137 318 ntBASIC4.26□□□□□ -1.73
TPM1P09493 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.26□□□□□ -1.73
TPM1P09493 MTND4P11-201ENST00000417020 1058 ntBASIC4.26□□□□□ -1.73
TPM1P09493 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TPM1P09493 AC092832.1-201ENST00000422934 400 ntBASIC4.26□□□□□ -1.73
TPM1P09493 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.26□□□□□ -1.73
TPM1P09493 AL392003.1-201ENST00000434394 243 ntBASIC4.26□□□□□ -1.73
TPM1P09493 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.26□□□□□ -1.73
TPM1P09493 CBX1P1-201ENST00000440184 427 ntBASIC4.26□□□□□ -1.73
TPM1P09493 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.26□□□□□ -1.73
TPM1P09493 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.26□□□□□ -1.73
TPM1P09493 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.26□□□□□ -1.73
TPM1P09493 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.26□□□□□ -1.73
TPM1P09493 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.26□□□□□ -1.73
TPM1P09493 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.26□□□□□ -1.73
TPM1P09493 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.26□□□□□ -1.73
TPM1P09493 SNORD108-201ENST00000459332 71 ntBASIC4.26□□□□□ -1.73
TPM1P09493 AC004801.2-202ENST00000463559 283 ntBASIC4.26□□□□□ -1.73
TPM1P09493 RPL32P9-201ENST00000487963 407 ntBASIC4.26□□□□□ -1.73
TPM1P09493 AC012170.1-201ENST00000495139 359 ntBASIC4.26□□□□□ -1.73
TPM1P09493 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.26□□□□□ -1.73
TPM1P09493 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TPM1P09493 CYCSP29-201ENST00000533731 318 ntBASIC4.26□□□□□ -1.73
TPM1P09493 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.26□□□□□ -1.73
TPM1P09493 AC090877.1-201ENST00000561418 344 ntBASIC4.26□□□□□ -1.73
TPM1P09493 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.26□□□□□ -1.73
TPM1P09493 IPO5P1-202ENST00000600039 287 ntBASIC4.26□□□□□ -1.73
TPM1P09493 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.26□□□□□ -1.73
TPM1P09493 AC020978.9-201ENST00000624380 1141 ntBASIC4.26□□□□□ -1.73
TPM1P09493 AC010608.2-201ENST00000624830 470 ntBASIC4.26□□□□□ -1.73
TPM1P09493 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.26□□□□□ -1.73
TPM1P09493 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TPM1P09493 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
TPM1P09493 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TPM1P09493 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.26□□□□□ -1.73
TPM1P09493 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TPM1P09493 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TPM1P09493 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TPM1P09493 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.25□□□□□ -1.73
TPM1P09493 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TPM1P09493 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TPM1P09493 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TPM1P09493 IGKV7-3-201ENST00000357453 298 ntBASIC4.25□□□□□ -1.73
TPM1P09493 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TPM1P09493 RNU11-4P-201ENST00000391149 133 ntBASIC4.25□□□□□ -1.73
TPM1P09493 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.25□□□□□ -1.73
TPM1P09493 AC010740.1-201ENST00000417035 684 ntBASIC4.25□□□□□ -1.73
TPM1P09493 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TPM1P09493 AC002075.2-201ENST00000425207 252 ntBASIC4.25□□□□□ -1.73
TPM1P09493 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TPM1P09493 USP9YP7-201ENST00000436723 430 ntBASIC4.25□□□□□ -1.73
TPM1P09493 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.25□□□□□ -1.73
TPM1P09493 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.25□□□□□ -1.73
TPM1P09493 USP9YP32-201ENST00000452432 430 ntBASIC4.25□□□□□ -1.73
TPM1P09493 RPL23AP14-201ENST00000468281 468 ntBASIC4.25□□□□□ -1.73
TPM1P09493 AC041039.1-201ENST00000485656 536 ntBASIC4.25□□□□□ -1.73
TPM1P09493 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.25□□□□□ -1.73
TPM1P09493 AC013356.1-201ENST00000489027 564 ntBASIC4.25□□□□□ -1.73
TPM1P09493 TRBV12-2-201ENST00000489763 344 ntBASIC4.25□□□□□ -1.73
TPM1P09493 AL132838.2-201ENST00000492041 314 ntBASIC4.25□□□□□ -1.73
TPM1P09493 OR5H4P-201ENST00000510851 923 ntBASIC4.25□□□□□ -1.73
TPM1P09493 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
TPM1P09493 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.25□□□□□ -1.73
TPM1P09493 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.25□□□□□ -1.73
TPM1P09493 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.25□□□□□ -1.73
TPM1P09493 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms