Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 MIR5684-201ENST00000585074 65 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AL034351.1-201ENST00000605288 668 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AC015802.5-201ENST00000607478 399 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AC083809.1-201ENST00000615051 472 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AC016957.2-201ENST00000616998 848 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AC091905.1-201ENST00000624400 311 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AC017002.4-201ENST00000604721 1525 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 RNU11-4P-201ENST00000391149 133 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 NPM1P10-201ENST00000398310 865 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 CCNB2P1-201ENST00000399411 1150 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 NCSTNP1-201ENST00000406229 144 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 Z86062.1-201ENST00000406773 777 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 Z98941.1-201ENST00000407764 100 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 CYP4F29P-201ENST00000420685 446 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 RPL21P109-201ENST00000422213 475 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 COX6CP15-201ENST00000426313 211 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 MTCYBP12-201ENST00000440559 1134 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 RPS4XP4-201ENST00000443195 763 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 CLIC4P1-201ENST00000453177 535 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 RN7SL604P-201ENST00000492589 296 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 SUMO1P1-201ENST00000497904 306 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 RN7SKP122-201ENST00000515923 296 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 HMGB1P46-201ENST00000520062 610 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AC008083.2-201ENST00000546707 476 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AC018552.3-201ENST00000567416 561 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 RN7SL600P-201ENST00000581811 299 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 SS18L2P2-201ENST00000583960 235 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AC005229.3-201ENST00000603438 323 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 CR589904.2-201ENST00000612533 440 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 MIR6716-201ENST00000613413 80 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AC006338.2-201ENST00000616864 791 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AC131238.1-201ENST00000617135 328 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 uc_338.9-201ENST00000617424 182 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 U7.8-201ENST00000619968 63 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AC093535.2-201ENST00000624769 2326 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 AL359715.4-201ENST00000606629 1436 ntBASIC3.51□□□□□ -1.85
HLA-DPB1P04440 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HLA-DPB1P04440 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AL121657.1-201ENST00000327215 531 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 RNU6-666P-201ENST00000363499 107 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 HMGB3P19-201ENST00000403971 560 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 RPL30P2-201ENST00000414021 291 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 RSL24D1P8-201ENST00000434442 492 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 TPT1P12-201ENST00000448968 492 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 HMGB1P5-202ENST00000451497 985 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 NANOGP10-201ENST00000453325 895 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AL354710.1-201ENST00000453641 246 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AC107398.1-201ENST00000486904 505 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms