Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 AL442163.2-201ENST00000553912 710 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 AC069061.3-201ENST00000582254 823 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 AL139344.1-201ENST00000605228 195 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 AP004247.3-201ENST00000608682 624 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 AC107075.1-201ENST00000613695 314 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 AC116563.2-201ENST00000624751 535 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL20A1Q9P218 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.28□□□□□ -1.56
COL20A1Q9P218 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL20A1Q9P218 AC112198.2-201ENST00000426589 6996 ntBASIC5.28□□□□□ -1.56
COL20A1Q9P218 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL20A1Q9P218 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL20A1Q9P218 SNORD113-6-201ENST00000363345 75 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 RNU5A-2P-201ENST00000384337 116 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL20A1Q9P218 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 AC004938.1-201ENST00000438468 308 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 NPM1P39-201ENST00000449818 867 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL20A1Q9P218 ATG12P2-201ENST00000456830 416 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 MTND2P28-201ENST00000457540 1044 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 PNPLA4P1-201ENST00000458328 305 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 AC025164.1-201ENST00000496249 478 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 AC135352.1-201ENST00000506173 1418 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 AP003461.1-201ENST00000528866 78 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 OR4C2P-201ENST00000530855 1064 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 DUXAP6-201ENST00000553858 601 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 AC115085.1-201ENST00000588924 229 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 PSMA6P4-201ENST00000603247 718 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 AP003973.1-201ENST00000604639 691 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 AP003392.5-201ENST00000607857 415 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 AL355816.1-201ENST00000607951 118 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 AC234782.5-201ENST00000617723 324 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 AL359757.1-201ENST00000623176 255 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL20A1Q9P218 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL20A1Q9P218 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
COL20A1Q9P218 AC005005.4-201ENST00000623789 16698 ntBASIC5.27□□□□□ -1.57
COL20A1Q9P218 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL20A1Q9P218 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 AC027228.2-201ENST00000567141 2154 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL20A1Q9P218 AL445487.1-201ENST00000415694 1580 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL20A1Q9P218 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL20A1Q9P218 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL20A1Q9P218 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 RNU6-619P-201ENST00000365146 108 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 SNORA62-201ENST00000365493 153 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 AP000580.1-201ENST00000404439 358 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 AL356131.1-201ENST00000405826 414 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 RNU2-65P-201ENST00000410162 185 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 COX6CP17-201ENST00000421389 185 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 RPL21P43-201ENST00000425440 472 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 ACTR3P2-201ENST00000439585 1257 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 FGF7P5-201ENST00000441829 291 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 MTCO2P25-201ENST00000447065 681 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 AC108734.3-201ENST00000481241 1165 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL20A1Q9P218 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 PDCL2P2-201ENST00000533651 189 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 AC091515.1-201ENST00000548110 679 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 MIR4284-201ENST00000578924 81 ntBASIC5.26□□□□□ -1.57
COL20A1Q9P218 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.26□□□□□ -1.57
COL20A1Q9P218 MIR4697-201ENST00000582977 78 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms