Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 RNA5SP22-201ENST00000365393 109 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 MIR16-1-201ENST00000385271 89 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 MIR3065-201ENST00000390137 79 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 TAF13P2-201ENST00000416876 286 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 RPS27AP7-201ENST00000422792 455 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 ELOCP6-201ENST00000429066 328 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AL513175.1-201ENST00000431492 780 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 RPS26P56-201ENST00000444468 240 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AC005008.1-201ENST00000456151 612 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 ELOCP12-201ENST00000458706 328 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 RNU7-140P-201ENST00000459546 60 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 RPL21P71-201ENST00000465598 459 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AC025674.1-201ENST00000507074 324 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 MIR4715-201ENST00000584117 79 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 BNIP3P27-201ENST00000599991 412 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AC079587.1-201ENST00000603846 277 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AP004247.3-201ENST00000608682 624 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AL133445.2-201ENST00000611191 527 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AP005019.3-201ENST00000620418 560 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 MIR6715B-201ENST00000637172 77 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AC139713.2-210ENST00000641741 992 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 BX649567.1-201ENST00000642071 1134 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AC107081.3-201ENST00000612715 2034 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 AL136964.1-201ENST00000622038 2990 ntBASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
BLOC1S4Q9NUP1 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 IL6STP1-201ENST00000346911 1020 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 RNU6-1293P-201ENST00000384077 107 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AC097374.1-203ENST00000400783 485 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 RN7SKP199-201ENST00000410325 305 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 RPS20P14-201ENST00000412545 360 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 OR51A3P-201ENST00000413596 924 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 LIPT1P1-201ENST00000415870 1186 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AL356387.2-201ENST00000422272 243 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AC234779.1-201ENST00000425910 285 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 UBE2V1P1-201ENST00000430836 445 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AC234064.1-201ENST00000436312 247 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 NDUFB4P12-201ENST00000513465 390 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AC022069.1-201ENST00000582910 658 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AC008759.1-201ENST00000589783 983 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AC008536.1-201ENST00000602872 669 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AC002487.1-201ENST00000604565 994 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AC105429.2-201ENST00000610567 517 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AC007546.1-201ENST00000619452 559 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 RNU6-156P-201ENST00000621869 107 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AL049777.1-201ENST00000622740 518 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AC068620.4-201ENST00000636730 1182 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 AC138393.1-206ENST00000540997 1886 ntBASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
BLOC1S4Q9NUP1 MFSD8-220ENST00000641243 1422 ntBASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms