Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 NMNAT1P1-201ENST00000554095 876 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AC021171.1-201ENST00000603137 706 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AC015914.2-201ENST00000618167 288 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AL731566.2-201ENST00000618971 317 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AP000346.3-201ENST00000622821 210 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AC015908.5-201ENST00000623289 343 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AF001550.2-201ENST00000636643 217 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AC021242.1-201ENST00000507315 2035 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 AC093535.2-201ENST00000624769 2326 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 RNU6-398P-201ENST00000384143 109 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 MIR1271-201ENST00000408537 86 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 RNA5SP80-201ENST00000410475 111 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 MTND4P22-201ENST00000413116 1169 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 OR2AH1P-201ENST00000425717 928 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 AL450023.3-201ENST00000440592 271 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 AC011753.3-201ENST00000443436 406 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 MTCO2P25-201ENST00000447065 681 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 PTMAP3-201ENST00000447474 330 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 ANKRD26P4-201ENST00000455755 950 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 RPS15AP1-201ENST00000457423 391 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 MRPS33P2-201ENST00000507850 322 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 KRT19P6-201ENST00000510983 209 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 RNU6-202P-201ENST00000515998 96 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 RAB9BP1-201ENST00000519581 626 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 SMARCE1P4-201ENST00000523647 241 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 OR5M2P-201ENST00000529003 936 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 PDCL2P2-201ENST00000533651 189 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 OR5AN2P-201ENST00000534535 896 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 SETP1-201ENST00000556014 845 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 NDUFB4P11-201ENST00000560510 395 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 BGLT3-201ENST00000564523 994 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 MIR4737-201ENST00000583979 81 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 NF1P5-201ENST00000588287 448 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 AL390838.2-201ENST00000602394 274 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 AC243756.2-201ENST00000618406 463 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 AL672167.1-205ENST00000641112 3080 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 AC109315.1-201ENST00000584143 1347 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 AL451142.2-201ENST00000429076 2090 ntBASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCDC33Q8N5R6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC33Q8N5R6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC33Q8N5R6 AC104454.1-201ENST00000421341 1401 ntBASIC5.15□□□□□ -1.58
CCDC33Q8N5R6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC33Q8N5R6 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC33Q8N5R6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC33Q8N5R6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC33Q8N5R6 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC33Q8N5R6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCDC33Q8N5R6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.15□□□□□ -1.58
CCDC33Q8N5R6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.15□□□□□ -1.58
CCDC33Q8N5R6 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCDC33Q8N5R6 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.15□□□□□ -1.59
CCDC33Q8N5R6 RNA5SP191-201ENST00000362585 102 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms