Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
BHLHA9Q7RTU4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
BHLHA9Q7RTU4 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.77□□□□□ -1.65
BHLHA9Q7RTU4 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BHLHA9Q7RTU4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.77□□□□□ -1.65
BHLHA9Q7RTU4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BHLHA9Q7RTU4 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AC233968.1-201ENST00000611212 1300 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AL137100.1-201ENST00000556703 1620 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AL138820.1-201ENST00000617901 5305 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 MAPK10-263ENST00000641052 4307 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 Z98745.1-201ENST00000402553 494 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 ELOCP19-201ENST00000411919 318 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AC138393.2-201ENST00000414742 246 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 OR6C64P-201ENST00000419708 825 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 RAD23BP1-201ENST00000421404 1227 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AL034379.1-201ENST00000423216 253 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 MTND1P2-201ENST00000430604 821 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 FTH1P16-201ENST00000435241 552 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 Z74696.2-201ENST00000436514 498 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AC092641.1-201ENST00000440229 772 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 MTND4LP16-201ENST00000440828 295 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 ARL2BPP10-201ENST00000446487 531 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AL445433.1-201ENST00000457507 257 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 ARL2BPP6-201ENST00000512757 439 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 RNA5SP446-201ENST00000515955 82 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 RNU6-334P-201ENST00000517072 102 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AP000827.1-201ENST00000527814 258 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AP001646.1-201ENST00000527936 915 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AP001317.1-201ENST00000531194 960 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 OR5AL2P-201ENST00000532185 920 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AC008759.1-201ENST00000589783 983 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AC090181.2-201ENST00000602975 672 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 RNF138P2-201ENST00000603490 592 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AC072039.2-201ENST00000608883 439 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AC019131.2-201ENST00000609071 870 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 AC131159.1-201ENST00000621854 213 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 OR9K1P-202ENST00000641111 3217 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 OR2L1P-202ENST00000641567 1023 ntBASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
BHLHA9Q7RTU4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 AC108751.5-201ENST00000492880 1336 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 LINC00622-201ENST00000562811 1570 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 AC108467.2-201ENST00000617640 1597 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 AC092326.2-201ENST00000624772 1561 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 AL133268.1-201ENST00000405676 1401 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 Y_RNA.517-201ENST00000384551 106 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 SDHCP2-201ENST00000398565 501 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 RPL23AP59-201ENST00000399415 461 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 RPL5P19-201ENST00000404228 893 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 FAR2P2-201ENST00000413041 594 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 MTATP6P27-201ENST00000416987 621 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 FAR2P4-202ENST00000425399 584 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 CENPIP1-201ENST00000425713 902 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 AL732292.1-201ENST00000426692 226 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 AC013262.1-201ENST00000426710 252 ntBASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.75□□□□□ -1.65
BHLHA9Q7RTU4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms