Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC091979.2-201ENST00000607514 214 ntBASIC3.92□□□□□ -1.78
NKX2-1P43699 AL445423.1-201ENST00000609941 536 ntBASIC3.92□□□□□ -1.78
NKX2-1P43699 AC079395.2-201ENST00000610982 737 ntBASIC3.92□□□□□ -1.78
NKX2-1P43699 AC090527.3-201ENST00000619041 548 ntBASIC3.92□□□□□ -1.78
NKX2-1P43699 AL512506.2-201ENST00000624472 458 ntBASIC3.92□□□□□ -1.78
NKX2-1P43699 AL049767.1-202ENST00000637826 242 ntBASIC3.92□□□□□ -1.78
NKX2-1P43699 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC3.92□□□□□ -1.78
NKX2-1P43699 ZNF663P-202ENST00000641770 1131 ntBASIC3.92□□□□□ -1.78
NKX2-1P43699 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.92□□□□□ -1.78
NKX2-1P43699 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.92□□□□□ -1.78
NKX2-1P43699 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NKX2-1P43699 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NKX2-1P43699 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NKX2-1P43699 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-1P43699 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-1P43699 Z73965.1-201ENST00000623412 2297 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
NKX2-1P43699 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-1P43699 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-1P43699 AC016716.1-201ENST00000265882 708 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-1P43699 OR56B2P-201ENST00000317102 954 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-1P43699 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX2-1P43699 RNU6-1293P-201ENST00000384077 107 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.91□□□□□ -1.78
NKX2-1P43699 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.91□□□□□ -1.78
NKX2-1P43699 OR4K6P-201ENST00000416478 897 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NKX2-1P43699 DPRXP1-201ENST00000426312 460 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 RAC1P8-201ENST00000427086 527 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 Z93242.1-201ENST00000427102 353 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 USP9YP11-201ENST00000427537 717 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 NPM1P34-201ENST00000428821 893 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 HIGD1AP4-201ENST00000430194 280 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.91□□□□□ -1.78
NKX2-1P43699 RPS6P15-201ENST00000431996 751 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 RPL7P34-201ENST00000433316 712 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 SETP8-201ENST00000435341 628 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-1P43699 OR7E125P-201ENST00000443450 846 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 HMGB1P16-201ENST00000447155 540 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 AC007327.1-201ENST00000447461 264 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX2-1P43699 AC104306.1-201ENST00000449702 371 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
NKX2-1P43699 PNPLA4P1-201ENST00000458328 305 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 RPL7AP28-201ENST00000464513 571 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 AC034244.1-201ENST00000507687 207 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 AC090071.1-201ENST00000507713 644 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 RNU5A-4P-201ENST00000516588 111 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.91□□□□□ -1.78
NKX2-1P43699 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-1P43699 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX2-1P43699 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX2-1P43699 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX2-1P43699 AP001636.2-201ENST00000525517 696 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX2-1P43699 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX2-1P43699 AC022882.1-201ENST00000532142 501 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.91□□□□□ -1.78
NKX2-1P43699 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX2-1P43699 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX2-1P43699 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.91□□□□□ -1.78
NKX2-1P43699 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.91□□□□□ -1.78
NKX2-1P43699 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.91□□□□□ -1.78
NKX2-1P43699 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX2-1P43699 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX2-1P43699 AC015688.2-201ENST00000584523 262 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 AC067852.4-201ENST00000590314 478 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 VN1R83P-201ENST00000595685 445 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.91□□□□□ -1.78
NKX2-1P43699 AC011445.2-201ENST00000599274 173 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX2-1P43699 RPL26P30-202ENST00000602923 645 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.91□□□□□ -1.78
NKX2-1P43699 AC069545.1-201ENST00000605671 358 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 AC092954.1-201ENST00000609121 445 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-1P43699 RNU6-156P-201ENST00000621869 107 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 AL359757.1-201ENST00000623176 255 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 AP003485.2-201ENST00000623636 610 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 AP000843.1-201ENST00000624880 701 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 BMS1P21-201ENST00000634565 365 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 CASC19-264ENST00000641912 1184 ntBASIC3.91□□□□□ -1.78
NKX2-1P43699 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-1P43699 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-1P43699 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NKX2-1P43699 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.91□□□□□ -1.78
NKX2-1P43699 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.9□□□□□ -1.78
NKX2-1P43699 MTND5P31-201ENST00000419366 1374 ntBASIC3.9□□□□□ -1.78
NKX2-1P43699 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NKX2-1P43699 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NKX2-1P43699 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.78
NKX2-1P43699 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NKX2-1P43699 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NKX2-1P43699 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NKX2-1P43699 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms