Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL356473.1-201ENST00000406203 1408 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 SNORA40.2-201ENST00000390847 128 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 ARL4AP5-201ENST00000404372 599 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 NACAP7-201ENST00000407371 609 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 MTND4P20-201ENST00000424125 869 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DOAP06340 VTI1BP4-201ENST00000427516 527 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 MTCO2P18-201ENST00000457151 658 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 RNU7-140P-201ENST00000459546 60 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 BZW1P2-201ENST00000473537 826 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC084024.2-201ENST00000503480 791 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 HPRT1P2-201ENST00000505250 544 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC091860.1-201ENST00000505723 432 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC134698.4-201ENST00000523451 826 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AL049870.4-201ENST00000555741 486 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC087477.6-201ENST00000559595 843 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC016839.1-201ENST00000578162 867 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AL590229.1-201ENST00000603497 542 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AP000811.1-201ENST00000603803 651 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC107304.1-201ENST00000604229 296 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 RNU6-84P-201ENST00000607737 102 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AL139418.1-201ENST00000613613 177 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC107075.1-201ENST00000613695 314 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AL158062.1-201ENST00000619632 745 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC007494.3-201ENST00000624660 743 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC006042.3-201ENST00000454684 1469 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 NAMPTP1-201ENST00000440465 2514 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DOAP06340 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AL445487.1-201ENST00000415694 1580 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DOAP06340 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DOAP06340 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AC026951.1-201ENST00000559530 2459 ntBASIC5.49□□□□□ -1.53
HLA-DOAP06340 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DOAP06340 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DOAP06340 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 ICE2P1-201ENST00000512800 1849 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DOAP06340 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DOAP06340 AL031119.1-201ENST00000404707 1879 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DOAP06340 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DOAP06340 AC021146.4-201ENST00000309229 279 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DOAP06340 RNU1-87P-201ENST00000363727 170 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 RPS3AP26-201ENST00000398259 784 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 SDHCP2-201ENST00000398565 501 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 LINC01881-201ENST00000416103 412 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 AL732292.1-201ENST00000426692 226 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 AP000936.2-201ENST00000447151 681 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 AC239798.3-201ENST00000454459 408 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 PSMC1P13-201ENST00000458195 985 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 SCARNA10-201ENST00000459255 330 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 SYPL1P1-201ENST00000473622 768 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 RNA5SP249-201ENST00000516127 99 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 AC022662.1-201ENST00000580252 331 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 AC106791.2-201ENST00000604680 391 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms