Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 IGKV2D-10-201ENST00000520194 281 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.11□□□□□ -1.75
PDLIM1O00151 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.11□□□□□ -1.75
PDLIM1O00151 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.11□□□□□ -1.75
PDLIM1O00151 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.11□□□□□ -1.75
PDLIM1O00151 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.11□□□□□ -1.75
PDLIM1O00151 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.11□□□□□ -1.75
PDLIM1O00151 MIR4512-201ENST00000583257 77 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.11□□□□□ -1.75
PDLIM1O00151 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 AC104785.1-201ENST00000603220 588 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.11□□□□□ -1.75
PDLIM1O00151 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PDLIM1O00151 AC010435.1-201ENST00000623353 1177 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 AC019278.1-201ENST00000623516 479 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 FRG1DP-201ENST00000635586 771 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM1O00151 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM1O00151 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.11□□□□□ -1.75
PDLIM1O00151 DHX40P1-201ENST00000588725 1412 ntBASIC4.11□□□□□ -1.75
PDLIM1O00151 LINC00622-201ENST00000562811 1570 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.1□□□□□ -1.75
PDLIM1O00151 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM1O00151 CPHL1P-201ENST00000461341 3407 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
PDLIM1O00151 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM1O00151 MFSD8-242ENST00000641690 4199 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PDLIM1O00151 RNU1-18P-201ENST00000363062 164 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 SNORD113.2-201ENST00000364166 89 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM1O00151 RNU6-398P-201ENST00000384143 109 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 RPS16P5-201ENST00000406501 404 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 SNORA3C-201ENST00000408792 125 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 RN7SKP106-201ENST00000410832 272 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 ATP5HP2-201ENST00000433885 485 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 RPL23AP89-201ENST00000439324 255 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM1O00151 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.1□□□□□ -1.75
PDLIM1O00151 AC012671.1-201ENST00000451912 203 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 VN1R32P-201ENST00000452234 905 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM1O00151 TRAV31-201ENST00000502780 342 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 BTF3L4P4-201ENST00000506381 449 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.1□□□□□ -1.75
PDLIM1O00151 SNORD116-26-201ENST00000516006 96 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 SNORA26.10-201ENST00000516427 141 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 RNA5SP73-201ENST00000516744 108 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM1O00151 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 CIR1P1-201ENST00000524055 1133 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.1□□□□□ -1.75
PDLIM1O00151 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM1O00151 AL136520.1-202ENST00000555494 763 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.1□□□□□ -1.75
PDLIM1O00151 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM1O00151 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.1□□□□□ -1.75
PDLIM1O00151 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM1O00151 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM1O00151 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM1O00151 AC055764.2-201ENST00000610089 670 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 AL512506.1-201ENST00000613918 449 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 AC245389.2-201ENST00000616023 576 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.1□□□□□ -1.75
PDLIM1O00151 AC242843.1-201ENST00000618702 573 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 AC006213.5-201ENST00000619673 288 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 C2orf27A-204ENST00000623058 969 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 AC000123.2-201ENST00000623124 461 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.1□□□□□ -1.75
PDLIM1O00151 U3.53-201ENST00000628922 216 ntBASIC4.1□□□□□ -1.75
PDLIM1O00151 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM1O00151 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM1O00151 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM1O00151 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM1O00151 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PDLIM1O00151 NCAPGP1-201ENST00000505112 1814 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PDLIM1O00151 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM1O00151 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM1O00151 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM1O00151 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM1O00151 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM1O00151 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.09□□□□□ -1.75
PDLIM1O00151 OR4K15-201ENST00000305051 1216 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM1O00151 RNA5SP505-201ENST00000364748 108 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PDLIM1O00151 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
PDLIM1O00151 RPS20P14-201ENST00000412545 360 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.09□□□□□ -1.75
PDLIM1O00151 RPL26P29-201ENST00000415623 438 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 LINC01881-201ENST00000416103 412 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 AC119751.6-201ENST00000416712 186 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 AC127526.1-201ENST00000417526 366 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.09□□□□□ -1.75
PDLIM1O00151 ARF4P2-201ENST00000430209 526 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.09□□□□□ -1.75
PDLIM1O00151 AC083863.1-201ENST00000438811 231 ntBASIC4.09□□□□□ -1.75
PDLIM1O00151 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
PDLIM1O00151 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms