Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
ARHGEF39Q8N4T4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.54□□□□□ -1.52
ARHGEF39Q8N4T4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ARHGEF39Q8N4T4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
ARHGEF39Q8N4T4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC092079.1-201ENST00000558620 1985 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 DHFRP6-201ENST00000401776 268 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 RPS3AP2-201ENST00000407190 754 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AL023807.1-201ENST00000407932 359 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 RPS3AP9-201ENST00000417027 792 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC016831.2-201ENST00000417179 352 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 NPM1P24-201ENST00000428039 894 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 USP24P1-201ENST00000433802 779 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC096775.1-201ENST00000437724 448 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 SUMO2P3-201ENST00000438311 288 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AL445665.1-202ENST00000452436 324 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 SBDSP1-204ENST00000453858 737 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 C1DP4-201ENST00000455429 424 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 RPS23P6-201ENST00000466136 431 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 RPL31P50-201ENST00000471002 296 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 RBM43P1-201ENST00000476891 1081 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 NENFP3-201ENST00000503735 313 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 Y_RNA.672-201ENST00000516289 104 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 RNU6-358P-201ENST00000516564 75 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 snoU109.6-201ENST00000516831 118 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 HSPA8P13-201ENST00000523715 472 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 MTND1P35-201ENST00000526739 508 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AP003122.4-201ENST00000530980 758 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC090424.1-201ENST00000535243 736 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 BBIP1P1-201ENST00000602999 279 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC090948.2-201ENST00000607363 564 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AL161734.1-201ENST00000609720 557 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC069234.4-201ENST00000621276 412 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 XPOTP1-201ENST00000443317 2398 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC140479.2-201ENST00000421567 3130 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC018628.1-201ENST00000624147 3819 ntBASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.53□□□□□ -1.52
ARHGEF39Q8N4T4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 MIR375-201ENST00000362103 64 ntBASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 Y_RNA.38-201ENST00000362617 102 ntBASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 Y_RNA.89-201ENST00000363031 102 ntBASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 SNORD1C-201ENST00000363315 78 ntBASIC5.52□□□□□ -1.53
ARHGEF39Q8N4T4 RNU6-1085P-201ENST00000363576 107 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms