Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
VARS2Q5ST30 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 DUX4L52-201ENST00000549363 777 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 AC104465.1-201ENST00000611365 139 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 AL357559.1-201ENST00000622228 274 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARS2Q5ST30 AL162171.3-201ENST00000617439 3178 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 FLJ42393-201ENST00000623801 2270 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARS2Q5ST30 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 AC074029.4-201ENST00000624796 1859 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 SAMMSON-222ENST00000641901 2727 ntBASIC7.55□□□□□ -1.2
VARS2Q5ST30 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARS2Q5ST30 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.55□□□□□ -1.2
VARS2Q5ST30 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARS2Q5ST30 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARS2Q5ST30 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
VARS2Q5ST30 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 KARSP2-201ENST00000415696 1639 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 SNORD62.1-201ENST00000362541 86 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 Y_RNA.383-201ENST00000383855 97 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 MIR215-201ENST00000384858 110 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 AL138885.1-201ENST00000405921 675 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 AL033519.1-201ENST00000407266 307 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 RPL18AP14-201ENST00000417685 526 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 RPS15AP30-201ENST00000420976 390 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 ELOCP18-201ENST00000434209 337 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 AL359265.2-201ENST00000434367 631 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 AC092106.2-201ENST00000436597 487 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 AC104472.2-201ENST00000469035 601 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 AC114982.1-201ENST00000469402 321 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 AC120036.3-201ENST00000517826 292 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 AP001858.2-201ENST00000536213 601 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 HSPE1P3-201ENST00000559254 309 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 AC010287.1-201ENST00000566916 357 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 VN1R91P-201ENST00000594377 169 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 AC008687.2-201ENST00000597865 520 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 AL359091.2-201ENST00000609303 556 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 MIR7109-201ENST00000613748 65 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 AC011155.2-201ENST00000623202 216 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 AC091895.1-201ENST00000624494 256 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
VARS2Q5ST30 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 AC125603.4-201ENST00000621942 2699 ntBASIC7.54□□□□□ -1.2
VARS2Q5ST30 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
VARS2Q5ST30 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
VARS2Q5ST30 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARS2Q5ST30 AC004014.2-201ENST00000623718 5122 ntBASIC7.53□□□□□ -1.2
VARS2Q5ST30 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
VARS2Q5ST30 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
VARS2Q5ST30 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARS2Q5ST30 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
VARS2Q5ST30 SNORA23-201ENST00000365128 182 ntBASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms