Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL451074.6-201ENST00000608512 729 ntBASIC4.46□□□□□ -1.7
CDH12P55289 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDH12P55289 AC009090.3-201ENST00000616553 565 ntBASIC4.46□□□□□ -1.7
CDH12P55289 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH12P55289 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.46□□□□□ -1.7
CDH12P55289 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH12P55289 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH12P55289 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CDH12P55289 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CDH12P55289 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.46□□□□□ -1.7
CDH12P55289 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CDH12P55289 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CDH12P55289 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH12P55289 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH12P55289 ASNSP1-204ENST00000641977 1664 ntBASIC4.45□□□□□ -1.7
CDH12P55289 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
CDH12P55289 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.45□□□□□ -1.7
CDH12P55289 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH12P55289 AP000526.1-201ENST00000603308 1388 ntBASIC4.45□□□□□ -1.7
CDH12P55289 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
CDH12P55289 AC096656.1-201ENST00000623826 1364 ntBASIC4.45□□□□□ -1.7
CDH12P55289 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH12P55289 RNU4-44P-201ENST00000363050 141 ntBASIC4.45□□□□□ -1.7
CDH12P55289 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH12P55289 Z97832.1-201ENST00000402490 328 ntBASIC4.45□□□□□ -1.7
CDH12P55289 RN7SKP247-201ENST00000411094 308 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH12P55289 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH12P55289 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH12P55289 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH12P55289 AL161449.1-201ENST00000414531 1199 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH12P55289 MRPS36P1-201ENST00000421291 307 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AL139421.1-201ENST00000423010 169 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AL365203.2-201ENST00000423444 196 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH12P55289 DPRXP1-201ENST00000426312 460 ntBASIC4.45□□□□□ -1.7
CDH12P55289 Z93242.1-201ENST00000427102 353 ntBASIC4.45□□□□□ -1.7
CDH12P55289 USP9YP31-201ENST00000431405 881 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AC005345.1-201ENST00000431868 217 ntBASIC4.45□□□□□ -1.7
CDH12P55289 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH12P55289 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH12P55289 SEPT7P5-201ENST00000434048 306 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AL451139.1-201ENST00000434718 346 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH12P55289 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH12P55289 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH12P55289 KATNBL1P3-201ENST00000443475 909 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH12P55289 AC022431.1-201ENST00000450941 438 ntBASIC4.45□□□□□ -1.7
CDH12P55289 RFC5P1-201ENST00000454419 874 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AP000942.1-201ENST00000463969 747 ntBASIC4.45□□□□□ -1.7
CDH12P55289 RPL21P6-201ENST00000479171 504 ntBASIC4.45□□□□□ -1.7
CDH12P55289 RN7SL319P-201ENST00000480656 221 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AC108734.3-201ENST00000481241 1165 ntBASIC4.45□□□□□ -1.7
CDH12P55289 RN7SL558P-201ENST00000497468 299 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDH12P55289 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH12P55289 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH12P55289 MRPS33P2-201ENST00000507850 322 ntBASIC4.45□□□□□ -1.7
CDH12P55289 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH12P55289 RNA5SP392-201ENST00000516905 112 ntBASIC4.45□□□□□ -1.7
CDH12P55289 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH12P55289 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH12P55289 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH12P55289 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.45□□□□□ -1.7
CDH12P55289 COX6B1P6-201ENST00000522347 255 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH12P55289 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH12P55289 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH12P55289 ELOCP32-201ENST00000548625 324 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AC004217.3-201ENST00000551552 878 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AL049839.1-201ENST00000556151 657 ntBASIC4.45□□□□□ -1.7
CDH12P55289 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH12P55289 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDH12P55289 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH12P55289 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH12P55289 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.45□□□□□ -1.7
CDH12P55289 MEMO1P5-201ENST00000604810 406 ntBASIC4.45□□□□□ -1.7
CDH12P55289 COX6CP4-201ENST00000605798 228 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AC093799.2-201ENST00000610062 578 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH12P55289 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AL022401.1-201ENST00000619498 108 ntBASIC4.45□□□□□ -1.7
CDH12P55289 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.45□□□□□ -1.7
CDH12P55289 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDH12P55289 LINC01739-205ENST00000641890 573 ntBASIC4.45□□□□□ -1.7
CDH12P55289 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH12P55289 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH12P55289 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.45□□□□□ -1.7
CDH12P55289 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH12P55289 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH12P55289 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDH12P55289 AC053481.2-202ENST00000582394 1500 ntBASIC4.45□□□□□ -1.7
CDH12P55289 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
CDH12P55289 AL049737.1-201ENST00000413920 1403 ntBASIC4.45□□□□□ -1.7
CDH12P55289 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDH12P55289 AC109315.1-201ENST00000584143 1347 ntBASIC4.45□□□□□ -1.7
CDH12P55289 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH12P55289 Z98755.1-201ENST00000407015 1384 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms