Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 AL357752.1-201ENST00000412817 349 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 Z93019.1-201ENST00000416450 973 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 AL139413.1-201ENST00000421309 217 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC12P31275 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXC12P31275 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXC12P31275 AC130360.1-201ENST00000425489 1117 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 RPEP2-201ENST00000432149 701 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 RPS3AP54-201ENST00000435535 734 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 RSU1P2-202ENST00000437884 485 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXC12P31275 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC12P31275 RPL36AP15-201ENST00000444514 266 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 HIGD1AP8-201ENST00000453927 274 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 HLA-DPA3-207ENST00000454398 229 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 RN7SL809P-201ENST00000482040 297 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 AC069439.1-201ENST00000494739 167 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 AC019235.1-201ENST00000503847 207 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXC12P31275 AC006390.1-201ENST00000508068 283 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 AC117522.1-201ENST00000509821 380 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXC12P31275 RNU6-1003P-201ENST00000517099 105 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC12P31275 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC12P31275 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC12P31275 AC130365.2-201ENST00000525882 1201 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXC12P31275 AP003122.4-201ENST00000530980 758 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC12P31275 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXC12P31275 NPIPB1P-202ENST00000588786 828 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC12P31275 CKS1BP3-201ENST00000600888 237 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC12P31275 BBIP1P1-201ENST00000602999 279 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 AC006363.1-201ENST00000603806 463 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 SUGT1P3-202ENST00000604259 383 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXC12P31275 AC104985.2-201ENST00000620598 500 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 DUXAP9-208ENST00000622815 614 ntBASIC5.47□□□□□ -1.53
HOXC12P31275 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXC12P31275 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC12P31275 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC12P31275 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC12P31275 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HOXC12P31275 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC12P31275 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HOXC12P31275 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC12P31275 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC12P31275 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC12P31275 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC12P31275 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HOXC12P31275 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HOXC12P31275 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.46□□□□□ -1.53
HOXC12P31275 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.53
HOXC12P31275 AC107027.3-201ENST00000565095 3473 ntBASIC5.46□□□□□ -1.53
HOXC12P31275 AC022905.1-201ENST00000503430 3048 ntBASIC5.46□□□□□ -1.53
HOXC12P31275 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC12P31275 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.46□□□□□ -1.54
HOXC12P31275 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC12P31275 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC12P31275 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HOXC12P31275 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC12P31275 SNORA51.6-201ENST00000384151 125 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 RNA5SP284-201ENST00000384547 118 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 RNU6-780P-201ENST00000391030 104 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 AL031679.1-201ENST00000400616 525 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC12P31275 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC12P31275 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HOXC12P31275 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC12P31275 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC12P31275 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC12P31275 AC127526.2-201ENST00000426436 775 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 AC096632.1-201ENST00000427395 310 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 MTND3P23-201ENST00000431980 347 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC12P31275 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 RPL17P49-201ENST00000443728 411 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HOXC12P31275 AC013356.1-201ENST00000489027 564 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 AC090453.1-201ENST00000495560 436 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC12P31275 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC12P31275 HMGB1P29-201ENST00000505659 499 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC12P31275 AC018797.3-201ENST00000513388 1241 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 COX6CP8-201ENST00000522620 226 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 AP001646.1-201ENST00000527936 915 ntBASIC5.46□□□□□ -1.54
HOXC12P31275 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXC12P31275 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC12P31275 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms