Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AC098799.3-201ENST00000506095 438 ntBASIC5.51□□□□□ -1.53
HLA-DOAP06340 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AC021146.8-201ENST00000507455 733 ntBASIC5.51□□□□□ -1.53
HLA-DOAP06340 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AC064872.1-201ENST00000604823 1072 ntBASIC5.51□□□□□ -1.53
HLA-DOAP06340 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AL121873.1-201ENST00000616013 524 ntBASIC5.51□□□□□ -1.53
HLA-DOAP06340 AC005899.7-201ENST00000618199 588 ntBASIC5.51□□□□□ -1.53
HLA-DOAP06340 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AC079248.2-201ENST00000623779 326 ntBASIC5.51□□□□□ -1.53
HLA-DOAP06340 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 AC083837.1-201ENST00000565297 2994 ntBASIC5.51□□□□□ -1.53
HLA-DOAP06340 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOAP06340 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.51□□□□□ -1.53
HLA-DOAP06340 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DOAP06340 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOAP06340 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOAP06340 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOAP06340 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC125257.1-201ENST00000560400 2930 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOAP06340 FAM3C2-201ENST00000312214 681 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 MIR133A2-201ENST00000347538 102 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 U3.22-201ENST00000391120 215 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 TAF13P2-201ENST00000416876 286 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 RPL12P34-201ENST00000424532 479 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 OR5BE1P-201ENST00000425977 939 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC092017.2-201ENST00000427600 362 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 MTND1P32-201ENST00000433043 938 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC004938.1-201ENST00000438468 308 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 YWHAZP2-201ENST00000440317 728 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 RPL21P133-201ENST00000443666 476 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC097499.1-201ENST00000444277 208 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 HSPE1P22-201ENST00000456856 327 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC107015.1-201ENST00000466902 747 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC098583.1-201ENST00000480875 255 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC026979.1-201ENST00000492525 396 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC093840.1-201ENST00000511599 336 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 NDUFB4P12-201ENST00000513465 390 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC015795.1-201ENST00000513669 327 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 OR5AK3P-201ENST00000527486 1297 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 ELOCP32-201ENST00000548625 324 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 CYCSP40-201ENST00000575927 294 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC010738.1-201ENST00000604970 987 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC006338.2-201ENST00000616864 791 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC139769.3-201ENST00000618383 175 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC090582.1-201ENST00000636321 199 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 OR5BE1P-202ENST00000641168 1176 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOAP06340 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 AC092376.2-201ENST00000622621 4116 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOAP06340 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOAP06340 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOAP06340 RAD17P1-201ENST00000418130 2042 ntBASIC5.5□□□□□ -1.53
HLA-DOAP06340 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
HLA-DOAP06340 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOAP06340 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.49□□□□□ -1.53
HLA-DOAP06340 AL390237.1-201ENST00000404226 1415 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms