Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC6.65□□□□□ -1.34
RAPGEF3O95398 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.65□□□□□ -1.34
RAPGEF3O95398 BX649567.1-201ENST00000642071 1134 ntBASIC6.65□□□□□ -1.34
RAPGEF3O95398 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
RAPGEF3O95398 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
RAPGEF3O95398 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
RAPGEF3O95398 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
RAPGEF3O95398 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RAPGEF3O95398 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
RAPGEF3O95398 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
RAPGEF3O95398 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
RAPGEF3O95398 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.65□□□□□ -1.35
RAPGEF3O95398 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
RAPGEF3O95398 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.65□□□□□ -1.35
RAPGEF3O95398 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.65□□□□□ -1.35
RAPGEF3O95398 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.65□□□□□ -1.35
RAPGEF3O95398 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RAPGEF3O95398 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RAPGEF3O95398 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
RAPGEF3O95398 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 SNORD116-2-201ENST00000384274 95 ntBASIC6.64□□□□□ -1.35
RAPGEF3O95398 SNORD116-6-201ENST00000384711 96 ntBASIC6.64□□□□□ -1.35
RAPGEF3O95398 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 FCF1P5-201ENST00000406490 482 ntBASIC6.64□□□□□ -1.35
RAPGEF3O95398 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 PSMC1P13-201ENST00000458195 985 ntBASIC6.64□□□□□ -1.35
RAPGEF3O95398 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 MTHFD2P4-201ENST00000515074 1025 ntBASIC6.64□□□□□ -1.35
RAPGEF3O95398 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 OR5AK3P-201ENST00000527486 1297 ntBASIC6.64□□□□□ -1.35
RAPGEF3O95398 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 AC107982.3-201ENST00000584957 985 ntBASIC6.64□□□□□ -1.35
RAPGEF3O95398 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 VN1R78P-201ENST00000597393 564 ntBASIC6.64□□□□□ -1.35
RAPGEF3O95398 SRGNP1-201ENST00000603392 451 ntBASIC6.64□□□□□ -1.35
RAPGEF3O95398 AL160281.1-201ENST00000605307 311 ntBASIC6.64□□□□□ -1.35
RAPGEF3O95398 AC078883.4-201ENST00000623218 367 ntBASIC6.64□□□□□ -1.35
RAPGEF3O95398 AP003399.1-201ENST00000637534 361 ntBASIC6.64□□□□□ -1.35
RAPGEF3O95398 AC119674.1-212ENST00000641155 993 ntBASIC6.64□□□□□ -1.35
RAPGEF3O95398 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
RAPGEF3O95398 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 ST7-221ENST00000465133 2155 ntTSL 5 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.64□□□□□ -1.35
RAPGEF3O95398 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RAPGEF3O95398 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RAPGEF3O95398 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RAPGEF3O95398 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
RAPGEF3O95398 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RAPGEF3O95398 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 RNU6-549P-201ENST00000384433 107 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RAPGEF3O95398 MCTS2P-201ENST00000394552 546 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 RNA5SP36-201ENST00000410197 133 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 RN7SKP235-201ENST00000410662 305 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 AL445213.1-201ENST00000412589 747 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 BX276092.6-201ENST00000430476 250 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 RPS3AP12-201ENST00000443616 753 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RAPGEF3O95398 CASP3P1-201ENST00000446037 609 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 Z99714.1-201ENST00000450463 807 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 OR52E3P-201ENST00000452083 936 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 BX276092.8-201ENST00000455722 250 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 AC021205.1-201ENST00000468797 348 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RAPGEF3O95398 AC011037.1-201ENST00000483964 558 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 AC008565.1-201ENST00000509046 885 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 AC099522.1-202ENST00000514718 367 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 DEFB130C-202ENST00000530001 230 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 AP000619.3-201ENST00000535634 1127 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RAPGEF3O95398 OSBPL9P5-201ENST00000542581 171 ntBASIC6.63□□□□□ -1.35
RAPGEF3O95398 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC6.63□□□□□ -1.35
RAPGEF3O95398 AC040958.1-201ENST00000561102 201 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms