Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LDB2O43679 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.62□□□□□ -1.67
LDB2O43679 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
LDB2O43679 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.62□□□□□ -1.67
LDB2O43679 VPS35P1-201ENST00000563400 1518 ntBASIC4.62□□□□□ -1.67
LDB2O43679 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LDB2O43679 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LDB2O43679 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LDB2O43679 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
LDB2O43679 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LDB2O43679 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
LDB2O43679 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LDB2O43679 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.61□□□□□ -1.67
LDB2O43679 OR5H2-201ENST00000355273 945 ntBASIC4.61□□□□□ -1.67
LDB2O43679 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LDB2O43679 RNU6-413P-201ENST00000384115 107 ntBASIC4.61□□□□□ -1.67
LDB2O43679 RNU6-398P-201ENST00000384143 109 ntBASIC4.61□□□□□ -1.67
LDB2O43679 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LDB2O43679 AL079342.2-201ENST00000403367 482 ntBASIC4.61□□□□□ -1.67
LDB2O43679 AL590084.1-201ENST00000407885 387 ntBASIC4.61□□□□□ -1.67
LDB2O43679 AC092745.2-202ENST00000411880 369 ntBASIC4.61□□□□□ -1.67
LDB2O43679 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.61□□□□□ -1.67
LDB2O43679 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.61□□□□□ -1.67
LDB2O43679 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.61□□□□□ -1.67
LDB2O43679 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.61□□□□□ -1.67
LDB2O43679 AL138878.2-201ENST00000440581 1241 ntBASIC4.61□□□□□ -1.67
LDB2O43679 AC005002.1-201ENST00000447458 540 ntBASIC4.61□□□□□ -1.67
LDB2O43679 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.61□□□□□ -1.67
LDB2O43679 AC009220.1-201ENST00000451614 275 ntBASIC4.61□□□□□ -1.67
LDB2O43679 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.61□□□□□ -1.67
LDB2O43679 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.61□□□□□ -1.67
LDB2O43679 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.61□□□□□ -1.67
LDB2O43679 AC091959.2-201ENST00000477363 321 ntBASIC4.61□□□□□ -1.67
LDB2O43679 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.61□□□□□ -1.67
LDB2O43679 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.61□□□□□ -1.67
LDB2O43679 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LDB2O43679 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.61□□□□□ -1.67
LDB2O43679 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.61□□□□□ -1.67
LDB2O43679 RNU5A-4P-201ENST00000516588 111 ntBASIC4.61□□□□□ -1.67
LDB2O43679 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.61□□□□□ -1.67
LDB2O43679 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.61□□□□□ -1.67
LDB2O43679 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.61□□□□□ -1.67
LDB2O43679 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LDB2O43679 AC124293.1-201ENST00000530034 493 ntBASIC4.61□□□□□ -1.67
LDB2O43679 AP006289.1-201ENST00000538089 277 ntBASIC4.61□□□□□ -1.67
LDB2O43679 GSTP1P1-201ENST00000548078 319 ntBASIC4.61□□□□□ -1.67
LDB2O43679 SETP1-201ENST00000556014 845 ntBASIC4.61□□□□□ -1.67
LDB2O43679 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.61□□□□□ -1.67
LDB2O43679 AL354943.1-201ENST00000572103 781 ntBASIC4.61□□□□□ -1.67
LDB2O43679 AC022662.1-201ENST00000580252 331 ntBASIC4.61□□□□□ -1.67
LDB2O43679 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.61□□□□□ -1.67
LDB2O43679 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LDB2O43679 ELOCP28-201ENST00000590044 317 ntBASIC4.61□□□□□ -1.67
LDB2O43679 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.61□□□□□ -1.67
LDB2O43679 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.61□□□□□ -1.67
LDB2O43679 AL137072.1-201ENST00000603444 466 ntBASIC4.61□□□□□ -1.67
LDB2O43679 Z94722.1-201ENST00000604328 474 ntBASIC4.61□□□□□ -1.67
LDB2O43679 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.61□□□□□ -1.67
LDB2O43679 SNORD91B-202ENST00000608459 222 ntBASIC4.61□□□□□ -1.67
LDB2O43679 AC005086.4-201ENST00000623065 213 ntBASIC4.61□□□□□ -1.67
LDB2O43679 MIR1322-201ENST00000638013 71 ntBASIC4.61□□□□□ -1.67
LDB2O43679 ZNF663P-202ENST00000641770 1131 ntBASIC4.61□□□□□ -1.67
LDB2O43679 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LDB2O43679 ZNF137P-201ENST00000456718 1920 ntBASIC4.61□□□□□ -1.67
LDB2O43679 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.61□□□□□ -1.67
LDB2O43679 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.61□□□□□ -1.67
LDB2O43679 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
LDB2O43679 AC093311.1-201ENST00000506586 2021 ntBASIC4.61□□□□□ -1.67
LDB2O43679 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
LDB2O43679 MTND5P31-201ENST00000419366 1374 ntBASIC4.61□□□□□ -1.67
LDB2O43679 MTCO1P6-201ENST00000481192 1384 ntBASIC4.61□□□□□ -1.67
LDB2O43679 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LDB2O43679 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
LDB2O43679 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LDB2O43679 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LDB2O43679 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
LDB2O43679 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LDB2O43679 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 AC138393.1-206ENST00000540997 1886 ntBASIC4.6□□□□□ -1.67
LDB2O43679 CASC19-284ENST00000642142 1868 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AC093591.2-201ENST00000565254 3843 ntBASIC4.6□□□□□ -1.67
LDB2O43679 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.6□□□□□ -1.67
LDB2O43679 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LDB2O43679 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LDB2O43679 AC021146.4-201ENST00000309229 279 ntBASIC4.6□□□□□ -1.67
LDB2O43679 RNA5SP505-201ENST00000364748 108 ntBASIC4.6□□□□□ -1.67
LDB2O43679 RNA5SP151-201ENST00000365632 117 ntBASIC4.6□□□□□ -1.67
LDB2O43679 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.6□□□□□ -1.67
LDB2O43679 RNU6-98P-201ENST00000384173 107 ntBASIC4.6□□□□□ -1.67
LDB2O43679 MIR141-201ENST00000384975 95 ntBASIC4.6□□□□□ -1.67
LDB2O43679 SNORA40.2-201ENST00000390847 128 ntBASIC4.6□□□□□ -1.67
LDB2O43679 AC136624.1-201ENST00000400791 413 ntBASIC4.6□□□□□ -1.67
LDB2O43679 MIR298-201ENST00000401212 88 ntBASIC4.6□□□□□ -1.67
LDB2O43679 Z98745.1-201ENST00000402553 494 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms