Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 MTND4LP31-201ENST00000514859 294 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 RNU6-1004P-201ENST00000516584 111 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AC008759.1-201ENST00000589783 983 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AC253576.2-201ENST00000618815 580 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AP002967.1-201ENST00000624203 539 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 USP9YP4-201ENST00000424401 1745 ntBASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NEDD8-MDP1E9PL57 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 MIR320B1-201ENST00000390209 79 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 RNU4-6P-201ENST00000410804 122 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 OR2X1P-201ENST00000421144 687 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 DPY19L1P2-201ENST00000426647 915 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 AL160175.1-201ENST00000428124 247 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 MTND2P2-201ENST00000434633 945 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 AC006011.1-201ENST00000442758 349 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 VN1R105P-201ENST00000486595 910 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 TPT1P3-201ENST00000492841 512 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 HAUS1P1-201ENST00000505275 832 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 FTH1P21-201ENST00000512179 511 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 HMGB1P23-201ENST00000518743 568 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 AL049870.4-201ENST00000555741 486 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 AC098483.2-201ENST00000603158 454 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 AC007390.2-201ENST00000606229 3803 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 AC084824.5-201ENST00000612009 413 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 MIR7151-201ENST00000617477 60 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 AC145207.9-201ENST00000623802 325 ntBASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NEDD8-MDP1E9PL57 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 CASC19-284ENST00000642142 1868 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 RNU1-108P-201ENST00000362556 161 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 RNU6-609P-201ENST00000365459 107 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 RPL32P23-201ENST00000397237 405 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 HSPE1P12-201ENST00000412576 301 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 XKRYP4-201ENST00000414395 483 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 RPL36AP36-201ENST00000418616 301 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AC115285.1-201ENST00000424879 736 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AC073335.1-201ENST00000427776 363 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AL512661.1-201ENST00000434586 1253 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 RPS29P7-201ENST00000439662 171 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AL357520.1-201ENST00000441557 453 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 RPS4XP4-201ENST00000443195 763 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 XKRYP5-201ENST00000449659 483 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AC021205.1-201ENST00000468797 348 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AC007537.2-201ENST00000472093 511 ntBASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.24□□□□□ -1.73
NEDD8-MDP1E9PL57 AC010460.1-201ENST00000507087 466 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms