Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NEUROD4Q9HD90 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NEUROD4Q9HD90 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
NEUROD4Q9HD90 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.33□□□□□ -1.4
NEUROD4Q9HD90 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.33□□□□□ -1.4
NEUROD4Q9HD90 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NEUROD4Q9HD90 MTND5P33-201ENST00000571250 1450 ntBASIC6.33□□□□□ -1.4
NEUROD4Q9HD90 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NEUROD4Q9HD90 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.33□□□□□ -1.4
NEUROD4Q9HD90 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.33□□□□□ -1.4
NEUROD4Q9HD90 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.33□□□□□ -1.4
NEUROD4Q9HD90 CAP1P2-201ENST00000417455 1409 ntBASIC6.33□□□□□ -1.4
NEUROD4Q9HD90 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NEUROD4Q9HD90 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
NEUROD4Q9HD90 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AL139384.2-201ENST00000613809 3590 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 ZNF806-201ENST00000438300 1774 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 MTCO1P7-201ENST00000419523 1542 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 MIR99A-201ENST00000384906 81 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 EIF5P1-201ENST00000400019 1231 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AL031679.1-201ENST00000400616 525 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 SNORA11.3-201ENST00000408471 128 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 RPL34P3-201ENST00000421454 338 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AL672212.1-201ENST00000422246 400 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AL356276.2-201ENST00000435919 558 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 PRPF38AP2-201ENST00000438179 851 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AMYP1-201ENST00000440059 1023 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AC022080.2-201ENST00000452932 533 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 H3F3AP3-201ENST00000497682 407 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AC004062.1-201ENST00000509926 645 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 FAM206BP-201ENST00000510179 541 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 PTP4A1P4-201ENST00000512479 322 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 IGHV3-57-201ENST00000520143 280 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AC140063.1-201ENST00000541343 259 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AC063950.1-201ENST00000552036 308 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 PPIAP6-201ENST00000557078 499 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 SNORA11.6-201ENST00000619030 128 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AC104162.1-201ENST00000430831 2382 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AL022323.4-201ENST00000623980 13120 ntBASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.32□□□□□ -1.4
NEUROD4Q9HD90 AL591848.4-201ENST00000567832 3472 ntBASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 MTND4P1-201ENST00000457501 1466 ntBASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 Y_RNA.193-201ENST00000363979 102 ntBASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 RNY1P12-201ENST00000364251 105 ntBASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 RN7SKP189-201ENST00000365042 330 ntBASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 RPL31P52-201ENST00000407532 367 ntBASIC6.31□□□□□ -1.4
NEUROD4Q9HD90 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms