Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 WBP11P1-201ENST00000562560 1931 ntBASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 Y_RNA.399-201ENST00000383955 105 ntBASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 SOD1P1-201ENST00000407803 440 ntBASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 AC123904.1-201ENST00000441072 368 ntBASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 AC239809.1-201ENST00000450470 217 ntBASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 SNORA35.1-201ENST00000458908 128 ntBASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 AC087190.1-201ENST00000484462 480 ntBASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 AC107032.1-201ENST00000485945 480 ntBASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 RNU6-1333P-201ENST00000516162 93 ntBASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 RNU6-911P-201ENST00000516523 104 ntBASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 ZNF33CP-201ENST00000432492 2030 ntBASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SCAF1Q9H7N4 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 CCDC150P1-201ENST00000537123 2215 ntBASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 TRIM51HP-202ENST00000530412 1823 ntBASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 RNU6-1219P-201ENST00000516143 112 ntBASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 IGHV7-40-201ENST00000520963 296 ntBASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AC009643.1-201ENST00000532030 391 ntBASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AL670379.6-201ENST00000603753 252 ntBASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AL670379.1-201ENST00000604752 252 ntBASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AL670379.2-201ENST00000604983 252 ntBASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AL670379.5-201ENST00000605253 252 ntBASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AL670379.8-201ENST00000605353 252 ntBASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AL670379.7-201ENST00000605823 252 ntBASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 SPATA31C2-201ENST00000324915 3777 ntBASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 AL162171.3-201ENST00000617439 3178 ntBASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 TCP11X1-202ENST00000622971 1372 ntBASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
SCAF1Q9H7N4 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 RN7SKP187-201ENST00000365536 330 ntBASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 AC009362.1-201ENST00000427253 406 ntBASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 AC007389.2-201ENST00000434630 306 ntBASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 RPL23AP74-201ENST00000437246 471 ntBASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 RPL12P49-201ENST00000441100 121 ntBASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 AL137074.1-201ENST00000442640 465 ntBASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 AC008958.1-201ENST00000511047 682 ntBASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 AC009127.3-201ENST00000570531 403 ntBASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 AC012488.1-201ENST00000611221 640 ntBASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC11.21□□□□□ -0.61
SCAF1Q9H7N4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
SCAF1Q9H7N4 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
SCAF1Q9H7N4 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms