Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDH1Q08174 NUP58P1-201ENST00000502546 1738 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDH1Q08174 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
PCDH1Q08174 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDH1Q08174 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDH1Q08174 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDH1Q08174 RNU5E-1-201ENST00000362477 120 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 RNU6-1120P-201ENST00000362988 108 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 RNU6-730P-201ENST00000383954 104 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 RNU6-729P-201ENST00000384399 107 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PCDH1Q08174 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PCDH1Q08174 AL139805.1-201ENST00000407837 289 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 RNU2-18P-201ENST00000411224 162 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 RAB28P1-201ENST00000411517 641 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDH1Q08174 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDH1Q08174 AL353678.1-201ENST00000422735 741 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDH1Q08174 RPL35AP12-201ENST00000425362 338 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 AL354707.3-201ENST00000427308 331 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDH1Q08174 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDH1Q08174 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDH1Q08174 RPL36AP53-201ENST00000432891 316 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDH1Q08174 RPL12P49-201ENST00000441100 121 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 USP9YP15-201ENST00000442391 422 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 RPS10P18-201ENST00000442662 495 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 REG1CP-206ENST00000447469 496 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 RPL37P3-201ENST00000456825 293 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDH1Q08174 AC026410.2-201ENST00000460281 156 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDH1Q08174 GM2AP2-201ENST00000491764 562 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PCDH1Q08174 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.03□□□□□ -1.44
PCDH1Q08174 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDH1Q08174 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDH1Q08174 RNU7-30P-201ENST00000516835 62 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 RNU6-714P-201ENST00000516963 103 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 RNA5SP400-201ENST00000517155 111 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 AC104986.1-201ENST00000517978 436 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDH1Q08174 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDH1Q08174 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDH1Q08174 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDH1Q08174 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.03□□□□□ -1.44
PCDH1Q08174 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDH1Q08174 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDH1Q08174 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDH1Q08174 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDH1Q08174 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 AL133255.1-201ENST00000606374 441 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 AL591167.1-201ENST00000607321 456 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 BX664608.1-201ENST00000610519 487 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 MIR6811-201ENST00000620409 58 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDH1Q08174 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDH1Q08174 TPTEP1-208ENST00000636884 213 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.03□□□□□ -1.44
PCDH1Q08174 LINC01613-201ENST00000561476 2780 ntBASIC6.03□□□□□ -1.44
PCDH1Q08174 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PCDH1Q08174 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.03□□□□□ -1.44
PCDH1Q08174 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.03□□□□□ -1.44
PCDH1Q08174 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
PCDH1Q08174 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
PCDH1Q08174 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.02□□□□□ -1.45
PCDH1Q08174 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDH1Q08174 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDH1Q08174 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDH1Q08174 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
PCDH1Q08174 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
PCDH1Q08174 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 AC079753.1-201ENST00000623243 3868 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDH1Q08174 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PCDH1Q08174 RNU1-49P-201ENST00000363468 159 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 RNU1-59P-201ENST00000364829 162 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
PCDH1Q08174 AL157702.1-201ENST00000398764 426 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 BTBD10P2-201ENST00000404779 676 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 AL162578.1-201ENST00000406202 378 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 AL354719.1-201ENST00000406535 843 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 RN7SKP240-201ENST00000410583 375 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 AP000534.2-201ENST00000412729 568 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.02□□□□□ -1.45
PCDH1Q08174 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.02□□□□□ -1.45
PCDH1Q08174 AC008280.1-201ENST00000418851 412 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 SLC35E1P1-201ENST00000419313 864 ntBASIC6.02□□□□□ -1.45
PCDH1Q08174 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PCDH1Q08174 AL592293.2-201ENST00000422292 996 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms