Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.3□□□□□ -1.72
TPM4P67936 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TPM4P67936 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.3□□□□□ -1.72
TPM4P67936 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.3□□□□□ -1.72
TPM4P67936 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TPM4P67936 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.3□□□□□ -1.72
TPM4P67936 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.3□□□□□ -1.72
TPM4P67936 IPO5P1-202ENST00000600039 287 ntBASIC4.3□□□□□ -1.72
TPM4P67936 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.3□□□□□ -1.72
TPM4P67936 AC007620.3-201ENST00000608131 497 ntBASIC4.3□□□□□ -1.72
TPM4P67936 RNVU1-4-201ENST00000612985 164 ntBASIC4.3□□□□□ -1.72
TPM4P67936 AC105105.5-201ENST00000622635 1294 ntBASIC4.3□□□□□ -1.72
TPM4P67936 AC011944.2-201ENST00000624440 683 ntBASIC4.3□□□□□ -1.72
TPM4P67936 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
TPM4P67936 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TPM4P67936 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TPM4P67936 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
TPM4P67936 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM4P67936 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TPM4P67936 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM4P67936 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.29□□□□□ -1.72
TPM4P67936 LARP1BP1-201ENST00000506036 1359 ntBASIC4.29□□□□□ -1.72
TPM4P67936 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.29□□□□□ -1.72
TPM4P67936 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM4P67936 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM4P67936 TPT1P2-201ENST00000413105 503 ntBASIC4.29□□□□□ -1.72
TPM4P67936 AL139128.1-201ENST00000413921 941 ntBASIC4.29□□□□□ -1.72
TPM4P67936 HIGD1AP12-201ENST00000427832 281 ntBASIC4.29□□□□□ -1.72
TPM4P67936 FTH1P6-201ENST00000430768 320 ntBASIC4.29□□□□□ -1.72
TPM4P67936 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.29□□□□□ -1.72
TPM4P67936 RPS11P1-201ENST00000451072 473 ntBASIC4.29□□□□□ -1.72
TPM4P67936 OR2AF1P-201ENST00000454899 889 ntBASIC4.29□□□□□ -1.72
TPM4P67936 RPL23AP14-201ENST00000468281 468 ntBASIC4.29□□□□□ -1.72
TPM4P67936 AC117394.1-201ENST00000477323 567 ntBASIC4.29□□□□□ -1.72
TPM4P67936 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.29□□□□□ -1.72
TPM4P67936 LARP7P4-201ENST00000481075 878 ntBASIC4.29□□□□□ -1.72
TPM4P67936 RPS27AP13-201ENST00000498403 237 ntBASIC4.29□□□□□ -1.72
TPM4P67936 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.29□□□□□ -1.72
TPM4P67936 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.29□□□□□ -1.72
TPM4P67936 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.29□□□□□ -1.72
TPM4P67936 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.29□□□□□ -1.72
TPM4P67936 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.29□□□□□ -1.72
TPM4P67936 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.29□□□□□ -1.72
TPM4P67936 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.29□□□□□ -1.72
TPM4P67936 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.29□□□□□ -1.72
TPM4P67936 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.29□□□□□ -1.72
TPM4P67936 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.29□□□□□ -1.72
TPM4P67936 AC087888.1-201ENST00000550884 1254 ntBASIC4.29□□□□□ -1.72
TPM4P67936 AC063949.1-201ENST00000552900 865 ntBASIC4.29□□□□□ -1.72
TPM4P67936 AC068831.4-201ENST00000556118 109 ntBASIC4.29□□□□□ -1.72
TPM4P67936 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.29□□□□□ -1.72
TPM4P67936 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.29□□□□□ -1.72
TPM4P67936 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.29□□□□□ -1.72
TPM4P67936 AL137849.1-201ENST00000604767 169 ntBASIC4.29□□□□□ -1.72
TPM4P67936 AC006946.3-201ENST00000609791 756 ntBASIC4.29□□□□□ -1.72
TPM4P67936 MIR8059-201ENST00000620427 81 ntBASIC4.29□□□□□ -1.72
TPM4P67936 OR5AC4P-202ENST00000642086 985 ntBASIC4.29□□□□□ -1.72
TPM4P67936 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TPM4P67936 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
TPM4P67936 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM4P67936 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
TPM4P67936 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.29□□□□□ -1.72
TPM4P67936 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM4P67936 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TPM4P67936 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM4P67936 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TPM4P67936 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TPM4P67936 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM4P67936 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TPM4P67936 IGKV7-3-201ENST00000357453 298 ntBASIC4.28□□□□□ -1.72
TPM4P67936 RNA5SP505-201ENST00000364748 108 ntBASIC4.28□□□□□ -1.72
TPM4P67936 ELOCP19-201ENST00000411919 318 ntBASIC4.28□□□□□ -1.72
TPM4P67936 AC048351.1-201ENST00000420064 602 ntBASIC4.28□□□□□ -1.72
TPM4P67936 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM4P67936 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM4P67936 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.28□□□□□ -1.72
TPM4P67936 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM4P67936 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.28□□□□□ -1.72
TPM4P67936 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM4P67936 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM4P67936 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
TPM4P67936 AC084198.1-201ENST00000477747 402 ntBASIC4.28□□□□□ -1.72
TPM4P67936 AC013356.1-201ENST00000489027 564 ntBASIC4.28□□□□□ -1.72
TPM4P67936 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.28□□□□□ -1.72
TPM4P67936 RNA5SP179-201ENST00000517284 121 ntBASIC4.28□□□□□ -1.72
TPM4P67936 AC087369.1-201ENST00000520775 996 ntBASIC4.28□□□□□ -1.72
TPM4P67936 AL121576.1-201ENST00000556055 276 ntBASIC4.28□□□□□ -1.72
TPM4P67936 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM4P67936 MIR4512-201ENST00000583257 77 ntBASIC4.28□□□□□ -1.72
TPM4P67936 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM4P67936 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM4P67936 AC091167.4-201ENST00000605079 184 ntBASIC4.28□□□□□ -1.72
TPM4P67936 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM4P67936 AC008121.2-201ENST00000614647 523 ntBASIC4.28□□□□□ -1.72
TPM4P67936 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM4P67936 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM4P67936 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TPM4P67936 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.28□□□□□ -1.72
TPM4P67936 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TPM4P67936 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms