Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 AL158801.5-201ENST00000623123 465 ntBASIC6.24□□□□□ -1.41
GRIK1P39086 AP003400.3-201ENST00000624904 346 ntBASIC6.24□□□□□ -1.41
GRIK1P39086 CRYM-AS1-204ENST00000637983 556 ntBASIC6.24□□□□□ -1.41
GRIK1P39086 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
GRIK1P39086 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.24□□□□□ -1.41
GRIK1P39086 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
GRIK1P39086 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.24□□□□□ -1.41
GRIK1P39086 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GRIK1P39086 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GRIK1P39086 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GRIK1P39086 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.24□□□□□ -1.41
GRIK1P39086 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GRIK1P39086 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GRIK1P39086 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
GRIK1P39086 DCAF13P3-201ENST00000561147 1334 ntBASIC6.24□□□□□ -1.41
GRIK1P39086 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
GRIK1P39086 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.23□□□□□ -1.41
GRIK1P39086 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GRIK1P39086 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.23□□□□□ -1.41
GRIK1P39086 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GRIK1P39086 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GRIK1P39086 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
GRIK1P39086 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GRIK1P39086 AC015689.2-201ENST00000528172 1738 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GRIK1P39086 RNU6-433P-201ENST00000363216 104 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 RNU5E-5P-201ENST00000365379 116 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 RNA5SP211-201ENST00000365516 117 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GRIK1P39086 RNU6-878P-201ENST00000384578 110 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
GRIK1P39086 HMGB3P18-201ENST00000406327 590 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 RPS3AP2-201ENST00000407190 754 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.23□□□□□ -1.41
GRIK1P39086 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.23□□□□□ -1.41
GRIK1P39086 HMGB3P20-201ENST00000417997 600 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 AL356583.2-201ENST00000426536 280 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.23□□□□□ -1.41
GRIK1P39086 ACTR3P2-201ENST00000439585 1257 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 AL663074.2-201ENST00000440621 479 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 AL121877.1-201ENST00000453704 622 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GRIK1P39086 PFN1P6-201ENST00000476786 399 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 PPIAP19-201ENST00000486414 492 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 ACTG1P13-201ENST00000486987 1043 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 AC012170.1-201ENST00000495139 359 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 RN7SL101P-201ENST00000496350 279 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.23□□□□□ -1.41
GRIK1P39086 AC011411.1-201ENST00000509592 876 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 RNU6-123P-201ENST00000516163 102 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 RN7SKP288-201ENST00000516227 268 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.23□□□□□ -1.41
GRIK1P39086 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC6.23□□□□□ -1.41
GRIK1P39086 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.23□□□□□ -1.41
GRIK1P39086 TXNP4-201ENST00000575018 310 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.23□□□□□ -1.41
GRIK1P39086 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.23□□□□□ -1.41
GRIK1P39086 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.23□□□□□ -1.41
GRIK1P39086 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.23□□□□□ -1.41
GRIK1P39086 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.23□□□□□ -1.41
GRIK1P39086 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.23□□□□□ -1.41
GRIK1P39086 AP005431.1-201ENST00000618479 319 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC6.23□□□□□ -1.41
GRIK1P39086 AC006504.8-201ENST00000621046 635 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 AC127024.6-201ENST00000621598 424 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 MIR4302-201ENST00000638058 60 ntBASIC6.23□□□□□ -1.41
GRIK1P39086 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.23□□□□□ -1.41
GRIK1P39086 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.23□□□□□ -1.41
GRIK1P39086 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.23□□□□□ -1.41
GRIK1P39086 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GRIK1P39086 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
GRIK1P39086 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
GRIK1P39086 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
GRIK1P39086 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GRIK1P39086 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.22□□□□□ -1.41
GRIK1P39086 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
GRIK1P39086 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.22□□□□□ -1.41
GRIK1P39086 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
GRIK1P39086 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
GRIK1P39086 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
GRIK1P39086 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
GRIK1P39086 RN7SKP81-201ENST00000365603 331 ntBASIC6.22□□□□□ -1.41
GRIK1P39086 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
GRIK1P39086 RNU6-331P-201ENST00000384724 107 ntBASIC6.22□□□□□ -1.41
GRIK1P39086 MIR137-201ENST00000385223 102 ntBASIC6.22□□□□□ -1.41
GRIK1P39086 AC005522.1-201ENST00000395416 346 ntBASIC6.22□□□□□ -1.41
GRIK1P39086 SNRPEP2-201ENST00000397592 279 ntBASIC6.22□□□□□ -1.41
GRIK1P39086 AL122016.1-201ENST00000403365 367 ntBASIC6.22□□□□□ -1.41
GRIK1P39086 OR4K12P-201ENST00000406538 961 ntBASIC6.22□□□□□ -1.41
GRIK1P39086 RN7SKP206-201ENST00000410823 293 ntBASIC6.22□□□□□ -1.41
GRIK1P39086 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.22□□□□□ -1.41
GRIK1P39086 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.22□□□□□ -1.41
GRIK1P39086 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.22□□□□□ -1.41
GRIK1P39086 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.22□□□□□ -1.41
GRIK1P39086 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.22□□□□□ -1.41
GRIK1P39086 RPL36AP39-201ENST00000445859 318 ntBASIC6.22□□□□□ -1.41
GRIK1P39086 SNRPGP6-201ENST00000451124 220 ntBASIC6.22□□□□□ -1.41
GRIK1P39086 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.22□□□□□ -1.41
GRIK1P39086 PSAT1P4-201ENST00000466500 526 ntBASIC6.22□□□□□ -1.41
GRIK1P39086 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms