Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 ANKRD55-201ENST00000341048 2502 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
HOXD11P31277 AL354993.1-201ENST00000436286 3280 ntTSL 4 BASIC8.83□□□□□ -1
HOXD11P31277 VSIG4-202ENST00000412866 1474 ntTSL 2 BASIC8.83□□□□□ -1
HOXD11P31277 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC8.83□□□□□ -1
HOXD11P31277 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC8.83□□□□□ -1
HOXD11P31277 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HOXD11P31277 MYO1H-201ENST00000310903 4364 ntTSL 5 BASIC8.82□□□□□ -1
HOXD11P31277 NLN-201ENST00000380985 8661 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HOXD11P31277 ZC3H6-201ENST00000343936 11539 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
HOXD11P31277 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC8.82□□□□□ -1
HOXD11P31277 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HOXD11P31277 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HOXD11P31277 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
HOXD11P31277 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HOXD11P31277 PRUNE1-204ENST00000368936 2788 ntTSL 1 (best) BASIC8.82□□□□□ -1
HOXD11P31277 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC8.82□□□□□ -1
HOXD11P31277 RNU6-1113P-201ENST00000384348 107 ntBASIC8.82□□□□□ -1
HOXD11P31277 MIR135A2-201ENST00000384854 100 ntBASIC8.82□□□□□ -1
HOXD11P31277 MIR34A-201ENST00000385130 110 ntBASIC8.82□□□□□ -1
HOXD11P31277 RNU6-788P-201ENST00000390967 104 ntBASIC8.82□□□□□ -1
HOXD11P31277 AC138761.5-201ENST00000433967 325 ntBASIC8.82□□□□□ -1
HOXD11P31277 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC8.82□□□□□ -1
HOXD11P31277 AC020658.1-201ENST00000471253 938 ntBASIC8.82□□□□□ -1
HOXD11P31277 RN7SL135P-201ENST00000490144 278 ntBASIC8.82□□□□□ -1
HOXD11P31277 FTH1P24-201ENST00000503502 462 ntBASIC8.82□□□□□ -1
HOXD11P31277 AC008453.1-201ENST00000511626 425 ntTSL 3 BASIC8.82□□□□□ -1
HOXD11P31277 AC098827.1-201ENST00000514630 667 ntBASIC8.82□□□□□ -1
HOXD11P31277 RNU6-781P-201ENST00000516377 101 ntBASIC8.82□□□□□ -1
HOXD11P31277 CYCSP23-201ENST00000519781 313 ntBASIC8.82□□□□□ -1
HOXD11P31277 IGKV2D-14-201ENST00000522473 355 ntBASIC8.82□□□□□ -1
HOXD11P31277 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC8.82□□□□□ -1
HOXD11P31277 AC018618.1-202ENST00000559590 395 ntTSL 3 BASIC8.82□□□□□ -1
HOXD11P31277 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
HOXD11P31277 AC069307.1-201ENST00000602820 447 ntBASIC8.82□□□□□ -1
HOXD11P31277 AL080285.2-201ENST00000612765 458 ntBASIC8.82□□□□□ -1
HOXD11P31277 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC8.82□□□□□ -1
HOXD11P31277 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.82□□□□□ -1
HOXD11P31277 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
HOXD11P31277 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
HOXD11P31277 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC8.82□□□□□ -1
HOXD11P31277 LOXHD1-211ENST00000579038 3632 ntTSL 1 (best) BASIC8.82□□□□□ -1
HOXD11P31277 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC8.82□□□□□ -1
HOXD11P31277 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HOXD11P31277 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC8.82□□□□□ -1
HOXD11P31277 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC8.82□□□□□ -1
HOXD11P31277 GFM2-202ENST00000345239 2856 ntTSL 1 (best) BASIC8.82□□□□□ -1
HOXD11P31277 ZNF41-201ENST00000313116 4297 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HOXD11P31277 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HOXD11P31277 AC009090.4-201ENST00000623921 3691 ntBASIC8.82□□□□□ -1
HOXD11P31277 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
HOXD11P31277 DIAPH3-204ENST00000400320 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
HOXD11P31277 SCYL3-203ENST00000367772 3090 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
HOXD11P31277 STK36-201ENST00000295709 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 AL359976.1-201ENST00000418655 3528 ntBASIC8.81□□□□□ -1
HOXD11P31277 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC8.81□□□□□ -1
HOXD11P31277 AC097461.1-201ENST00000568928 2821 ntBASIC8.81□□□□□ -1
HOXD11P31277 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC8.81□□□□□ -1
HOXD11P31277 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 MED1-202ENST00000394287 2870 ntTSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 LINC01354-202ENST00000435574 2860 ntTSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 ICE2-213ENST00000561114 3796 ntTSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC8.81□□□□□ -1
HOXD11P31277 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
HOXD11P31277 IQCB2P-201ENST00000401788 1633 ntBASIC8.81□□□□□ -1
HOXD11P31277 KCNT2-201ENST00000294725 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC8.81□□□□□ -1
HOXD11P31277 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
HOXD11P31277 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC8.81□□□□□ -1
HOXD11P31277 FBXO18-202ENST00000379999 3702 ntTSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 RBBP8-204ENST00000399722 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 RPL24P4-201ENST00000326586 421 ntBASIC8.81□□□□□ -1
HOXD11P31277 RNU6-942P-201ENST00000363002 107 ntBASIC8.81□□□□□ -1
HOXD11P31277 RNA5SP69-201ENST00000364477 117 ntBASIC8.81□□□□□ -1
HOXD11P31277 RNU6-597P-201ENST00000365620 102 ntBASIC8.81□□□□□ -1
HOXD11P31277 RNU6-440P-201ENST00000390882 105 ntBASIC8.81□□□□□ -1
HOXD11P31277 RNU6-972P-201ENST00000391208 107 ntBASIC8.81□□□□□ -1
HOXD11P31277 RN7SKP91-201ENST00000410852 288 ntBASIC8.81□□□□□ -1
HOXD11P31277 AC092447.6-201ENST00000414578 210 ntBASIC8.81□□□□□ -1
HOXD11P31277 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC8.81□□□□□ -1
HOXD11P31277 AC245047.4-201ENST00000433189 144 ntBASIC8.81□□□□□ -1
HOXD11P31277 EIF5AP4-201ENST00000441206 465 ntBASIC8.81□□□□□ -1
HOXD11P31277 AKR1D1P1-201ENST00000457236 936 ntBASIC8.81□□□□□ -1
HOXD11P31277 RNU6-1218P-201ENST00000458990 108 ntBASIC8.81□□□□□ -1
HOXD11P31277 RN7SL647P-201ENST00000485429 300 ntBASIC8.81□□□□□ -1
HOXD11P31277 TRIM16-214ENST00000579219 999 ntTSL 2 BASIC8.81□□□□□ -1
HOXD11P31277 AL596275.2-206ENST00000641957 626 ntBASIC8.81□□□□□ -1
HOXD11P31277 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 CLTCL1-211ENST00000621271 5313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 PPP6R3-214ENST00000527403 4862 ntTSL 5 BASIC8.81□□□□□ -1
HOXD11P31277 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 SLITRK1-201ENST00000377084 5189 ntAPPRIS P1 BASIC8.81□□□□□ -1
HOXD11P31277 AMPD3-208ENST00000528723 2753 ntTSL 2 BASIC8.81□□□□□ -1
HOXD11P31277 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
HOXD11P31277 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 236.1 ms