Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
RXRBP28702 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RXRBP28702 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
RXRBP28702 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.85□□□□□ -1.31
RXRBP28702 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.85□□□□□ -1.31
RXRBP28702 AC007159.1-201ENST00000566529 4706 ntBASIC6.85□□□□□ -1.31
RXRBP28702 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RXRBP28702 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RXRBP28702 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RXRBP28702 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RXRBP28702 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RXRBP28702 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.85□□□□□ -1.31
RXRBP28702 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.85□□□□□ -1.31
RXRBP28702 AL672167.2-201ENST00000377164 879 ntBASIC6.85□□□□□ -1.31
RXRBP28702 GSTA12P-201ENST00000402398 508 ntBASIC6.85□□□□□ -1.31
RXRBP28702 AL139098.1-201ENST00000407291 389 ntBASIC6.85□□□□□ -1.31
RXRBP28702 AC096921.1-201ENST00000411661 375 ntBASIC6.85□□□□□ -1.31
RXRBP28702 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC6.85□□□□□ -1.31
RXRBP28702 RPL23AP83-201ENST00000434984 473 ntBASIC6.85□□□□□ -1.31
RXRBP28702 RPS29P10-201ENST00000439197 166 ntBASIC6.85□□□□□ -1.31
RXRBP28702 RNU7-140P-201ENST00000459546 60 ntBASIC6.85□□□□□ -1.31
RXRBP28702 ATP5LP5-201ENST00000483050 299 ntBASIC6.85□□□□□ -1.31
RXRBP28702 AC023424.2-201ENST00000493479 777 ntBASIC6.85□□□□□ -1.31
RXRBP28702 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.85□□□□□ -1.31
RXRBP28702 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.85□□□□□ -1.31
RXRBP28702 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC6.85□□□□□ -1.31
RXRBP28702 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
RXRBP28702 AC046134.1-201ENST00000514454 666 ntBASIC6.85□□□□□ -1.31
RXRBP28702 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.85□□□□□ -1.31
RXRBP28702 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.85□□□□□ -1.31
RXRBP28702 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.85□□□□□ -1.31
RXRBP28702 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.85□□□□□ -1.31
RXRBP28702 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.85□□□□□ -1.31
RXRBP28702 AL121839.1-201ENST00000556233 1185 ntBASIC6.85□□□□□ -1.31
RXRBP28702 AC005730.3-201ENST00000583067 366 ntBASIC6.85□□□□□ -1.31
RXRBP28702 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.85□□□□□ -1.31
RXRBP28702 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.85□□□□□ -1.31
RXRBP28702 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.85□□□□□ -1.31
RXRBP28702 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.85□□□□□ -1.31
RXRBP28702 AP001267.4-201ENST00000602598 545 ntBASIC6.85□□□□□ -1.31
RXRBP28702 AP001836.1-201ENST00000604675 523 ntBASIC6.85□□□□□ -1.31
RXRBP28702 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.85□□□□□ -1.31
RXRBP28702 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC6.85□□□□□ -1.31
RXRBP28702 DOCK11P1-201ENST00000553480 5932 ntBASIC6.85□□□□□ -1.31
RXRBP28702 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
RXRBP28702 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.85□□□□□ -1.31
RXRBP28702 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RXRBP28702 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RXRBP28702 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RXRBP28702 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.85□□□□□ -1.31
RXRBP28702 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
RXRBP28702 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.85□□□□□ -1.31
RXRBP28702 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
RXRBP28702 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RXRBP28702 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.85□□□□□ -1.31
RXRBP28702 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.85□□□□□ -1.31
RXRBP28702 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
RXRBP28702 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RXRBP28702 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
RXRBP28702 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.84□□□□□ -1.31
RXRBP28702 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.84□□□□□ -1.31
RXRBP28702 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
RXRBP28702 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RXRBP28702 AL731566.1-201ENST00000620490 1937 ntBASIC6.84□□□□□ -1.31
RXRBP28702 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
RXRBP28702 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
RXRBP28702 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.84□□□□□ -1.31
RXRBP28702 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
RXRBP28702 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.84□□□□□ -1.31
RXRBP28702 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RXRBP28702 RNA5SP326-201ENST00000363209 110 ntBASIC6.84□□□□□ -1.31
RXRBP28702 Y_RNA.333-201ENST00000365274 102 ntBASIC6.84□□□□□ -1.31
RXRBP28702 RNU6-1042P-201ENST00000384204 107 ntBASIC6.84□□□□□ -1.31
RXRBP28702 RNY3P10-201ENST00000384764 102 ntBASIC6.84□□□□□ -1.31
RXRBP28702 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
RXRBP28702 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RXRBP28702 AL590002.1-201ENST00000406554 418 ntBASIC6.84□□□□□ -1.31
RXRBP28702 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RXRBP28702 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.84□□□□□ -1.31
RXRBP28702 BX510359.2-201ENST00000417920 305 ntBASIC6.84□□□□□ -1.31
RXRBP28702 Z97055.1-201ENST00000419730 712 ntBASIC6.84□□□□□ -1.31
RXRBP28702 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.84□□□□□ -1.31
RXRBP28702 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.84□□□□□ -1.31
RXRBP28702 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC6.84□□□□□ -1.31
RXRBP28702 AL136231.1-201ENST00000429407 730 ntBASIC6.84□□□□□ -1.31
RXRBP28702 ETF1P3-201ENST00000430422 1160 ntBASIC6.84□□□□□ -1.31
RXRBP28702 AC005154.2-201ENST00000438110 379 ntBASIC6.84□□□□□ -1.31
RXRBP28702 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.84□□□□□ -1.31
RXRBP28702 AL592437.1-201ENST00000443781 492 ntBASIC6.84□□□□□ -1.31
RXRBP28702 RPL5P13-201ENST00000462840 709 ntBASIC6.84□□□□□ -1.31
RXRBP28702 AC128716.1-201ENST00000475129 166 ntBASIC6.84□□□□□ -1.31
RXRBP28702 AC025674.1-201ENST00000507074 324 ntBASIC6.84□□□□□ -1.31
RXRBP28702 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RXRBP28702 SNORA20.3-201ENST00000516880 132 ntBASIC6.84□□□□□ -1.31
RXRBP28702 RNA5SP143-201ENST00000516936 115 ntBASIC6.84□□□□□ -1.31
RXRBP28702 MIR2116-201ENST00000517221 80 ntBASIC6.84□□□□□ -1.31
RXRBP28702 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.84□□□□□ -1.31
RXRBP28702 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.84□□□□□ -1.31
RXRBP28702 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.84□□□□□ -1.31
RXRBP28702 AL138976.2-201ENST00000563989 694 ntBASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms