Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 RNU6-984P-201ENST00000363236 109 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AC019155.1-201ENST00000382242 574 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AL356131.1-201ENST00000405826 414 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 MIR1182-201ENST00000408363 97 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 MTND2P20-201ENST00000440805 661 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 BX842559.2-201ENST00000451418 605 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AC092647.2-201ENST00000452998 253 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 TRBV26-201ENST00000456572 344 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 RN7SL826P-201ENST00000479724 288 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 RNF138P1-201ENST00000502765 546 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 RN7SKP66-201ENST00000516681 231 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AC092490.3-201ENST00000545370 572 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AC125611.1-201ENST00000549563 229 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AL161713.1-201ENST00000555538 145 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AC019322.1-201ENST00000571869 389 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AL139344.1-201ENST00000605228 195 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AC004948.1-201ENST00000609858 672 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AP002799.1-201ENST00000623552 423 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AC068057.2-201ENST00000624047 895 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AC022893.2-201ENST00000564832 3296 ntBASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL4A3BPQ9Y5P4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 FAM3C2-201ENST00000312214 681 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 RPL21P67-201ENST00000402896 478 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AC068533.2-201ENST00000411872 306 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 RAP1BP1-201ENST00000412709 553 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AL354941.1-201ENST00000438600 464 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 MTCYBP11-201ENST00000447254 1109 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 RPL7P31-201ENST00000450192 724 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AL109741.2-201ENST00000455561 343 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AC108161.1-201ENST00000461060 402 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AP000563.1-201ENST00000490865 758 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 HMGB1P28-201ENST00000507778 552 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 PGBD4P4-201ENST00000509673 613 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AC100784.1-201ENST00000522790 310 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 PTP4A1P6-201ENST00000531034 478 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 OR5AN2P-201ENST00000534535 896 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AC090502.2-201ENST00000549267 280 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AC067852.4-201ENST00000590314 478 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AP001521.1-201ENST00000609150 300 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AC090510.2-201ENST00000617465 629 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 AC092184.1-201ENST00000625042 715 ntBASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
COL4A3BPQ9Y5P4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms