Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RNU6-1218P-201ENST00000458990 108 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 RN7SKP283-201ENST00000517197 270 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 AC020937.1-201ENST00000519677 1013 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 OR4A2P-201ENST00000527276 913 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 AC092747.2-201ENST00000545069 983 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 AC087477.6-201ENST00000559595 843 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 AL354943.1-201ENST00000572103 781 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 AP005119.2-201ENST00000579735 1105 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 AL121873.1-201ENST00000616013 524 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 AC078883.4-201ENST00000623218 367 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL20A1Q9P218 TTC39DP-201ENST00000416781 1688 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 ASNSP1-204ENST00000641977 1664 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL20A1Q9P218 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL20A1Q9P218 ZFRP1-201ENST00000457579 2970 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 AC011755.1-201ENST00000623763 2049 ntBASIC5.33□□□□□ -1.56
COL20A1Q9P218 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.33□□□□□ -1.56
COL20A1Q9P218 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL20A1Q9P218 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL20A1Q9P218 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC104454.1-201ENST00000421341 1401 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AL355852.1-201ENST00000454081 1771 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 AP005901.5-201ENST00000545779 1796 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC119744.1-201ENST00000454746 1715 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL20A1Q9P218 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL20A1Q9P218 RNU6-707P-201ENST00000364647 95 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC007738.1-201ENST00000413892 348 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC004690.1-201ENST00000418216 328 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 C4BPAP2-201ENST00000428434 478 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 HMGB1P16-201ENST00000447155 540 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 PRDX3P4-201ENST00000470828 747 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC011979.1-201ENST00000472300 483 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC013356.1-201ENST00000489027 564 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC005912.1-201ENST00000495392 255 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 CYCSP40-201ENST00000575927 294 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC022509.4-201ENST00000621404 572 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC022079.1-201ENST00000621546 602 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 U3.53-201ENST00000628922 216 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC010329.2-201ENST00000595195 2737 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 AC009313.2-201ENST00000417893 1941 ntBASIC5.32□□□□□ -1.56
COL20A1Q9P218 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL20A1Q9P218 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL20A1Q9P218 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL20A1Q9P218 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL20A1Q9P218 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
COL20A1Q9P218 OR14L1P-202ENST00000641545 3009 ntBASIC5.31□□□□□ -1.56
COL20A1Q9P218 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
COL20A1Q9P218 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL20A1Q9P218 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL20A1Q9P218 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms