Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC104383.1-201ENST00000530297 370 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 MTND4P33-201ENST00000556706 766 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC060766.1-201ENST00000590824 627 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC098826.3-201ENST00000603823 466 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC080013.6-201ENST00000606185 215 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL162574.2-201ENST00000614618 657 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL355810.1-201ENST00000614629 552 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 TRIM44-201ENST00000299413 12964 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RNU6-294P-201ENST00000364999 102 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AP000580.1-201ENST00000404439 358 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 CYP4F30P-202ENST00000420048 405 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC018644.1-201ENST00000429934 551 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 NOTCH2P1-201ENST00000443481 624 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 USP9YP17-201ENST00000444617 696 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 KNOP1P3-201ENST00000446933 426 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC063943.1-201ENST00000465434 453 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RPL7P9-201ENST00000468715 747 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RPS3AP22-201ENST00000488297 769 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC106872.2-201ENST00000494303 480 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RNU6-714P-201ENST00000516963 103 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 IGHVIII-13-1-201ENST00000517613 291 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC104986.1-201ENST00000517978 436 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC100770.1-201ENST00000532310 322 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC074029.1-201ENST00000552531 1044 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 MIR4691-201ENST00000583764 85 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC104984.5-201ENST00000586878 94 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 CACNA1E-201ENST00000357570 7064 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 CACNA1E-206ENST00000367573 7067 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RN7SKP23-201ENST00000625159 4301 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL021877.2-201ENST00000624442 10684 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 FGF7P2-201ENST00000332473 296 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 IL6STP1-201ENST00000346911 1020 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RNA5SP447-201ENST00000363749 119 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC007068.1-201ENST00000396690 844 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 LSM5-206ENST00000409987 504 ntTSL 5 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AC073261.1-201ENST00000429409 121 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL590399.4-201ENST00000436561 601 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 YWHAQP9-201ENST00000445891 512 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 RBMY2TP-201ENST00000451162 947 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 AL136981.1-203ENST00000451452 3844 ntBASIC1.7□□□□□ -2.14
HMCN1Q96RW7 ACTR3P3-201ENST00000480448 893 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms