Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF43Q68DV7 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RNF43Q68DV7 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RNF43Q68DV7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.25□□□□□ -1.41
RNF43Q68DV7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RNF43Q68DV7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF43Q68DV7 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF43Q68DV7 AC011447.7-201ENST00000624228 1590 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 ZNF736P3Y-201ENST00000428264 1465 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL031985.3-201ENST00000565390 2449 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL359955.1-201ENST00000455242 3275 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 HMGB1P5-201ENST00000255320 642 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 SNORA74A-201ENST00000364089 198 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 RNU6-1263P-201ENST00000384601 106 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 MIR105-2-201ENST00000385083 81 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AC025750.1-201ENST00000399891 379 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL391361.1-201ENST00000405580 489 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 RN7SKP293-201ENST00000411389 296 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 BX284632.2-201ENST00000421091 399 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 NUP35P1-201ENST00000422734 947 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AC093084.1-201ENST00000424233 687 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 USP9YP36-201ENST00000424581 829 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 FCF1P1-201ENST00000432690 571 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 CYCSP11-201ENST00000436426 315 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 RPL7P11-201ENST00000437586 658 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL445466.1-201ENST00000448432 357 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 COX6CP18-201ENST00000448769 222 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 RPL23AP60-201ENST00000450011 454 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF43Q68DV7 Z82190.1-201ENST00000454534 490 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 MTCO3P20-201ENST00000454926 688 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL590639.1-201ENST00000456484 337 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 UBFD1P1-201ENST00000473259 814 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 RN7SL193P-201ENST00000491708 276 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AC114981.1-201ENST00000503897 678 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AC104108.1-201ENST00000509930 412 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 IGKV2-18-201ENST00000522607 343 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AP000648.1-201ENST00000529682 397 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 MIR5697-201ENST00000578045 78 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 MIR3171-201ENST00000584270 74 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 MIR6793-201ENST00000612376 63 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL442067.1-201ENST00000613261 223 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AL132822.1-201ENST00000617063 513 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 AC007342.8-201ENST00000623278 678 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF43Q68DV7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF43Q68DV7 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 GNL2P1-201ENST00000451274 2190 ntBASIC6.24□□□□□ -1.41
RNF43Q68DV7 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF43Q68DV7 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RNF43Q68DV7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC6.24□□□□□ -1.41
RNF43Q68DV7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RNF43Q68DV7 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RNF43Q68DV7 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RNF43Q68DV7 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF43Q68DV7 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.23□□□□□ -1.41
RNF43Q68DV7 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF43Q68DV7 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.23□□□□□ -1.41
RNF43Q68DV7 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
RNF43Q68DV7 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.23□□□□□ -1.41
RNF43Q68DV7 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
RNF43Q68DV7 AC024587.1-201ENST00000505925 2157 ntBASIC6.23□□□□□ -1.41
RNF43Q68DV7 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.23□□□□□ -1.41
RNF43Q68DV7 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
RNF43Q68DV7 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
RNF43Q68DV7 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms