Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RN7SKP107-201ENST00000364157 290 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 Y_RNA.471-201ENST00000384312 102 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 U3.39-201ENST00000408569 239 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 RN7SKP254-201ENST00000410685 310 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 RPL31P45-201ENST00000419532 356 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 MED13P1-201ENST00000428342 171 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 FTH1P20-201ENST00000434913 548 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 AC009518.3-201ENST00000438972 253 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 PSMC1P13-201ENST00000458195 985 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 AC104563.1-201ENST00000476147 376 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 RPL23AP41-201ENST00000484754 458 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 TMEM251P1-201ENST00000503717 318 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 AC007991.1-201ENST00000522680 631 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 MIR6885-201ENST00000612241 66 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
VARS2Q5ST30 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
VARS2Q5ST30 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 AC061975.7-201ENST00000592016 2692 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
VARS2Q5ST30 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
VARS2Q5ST30 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
VARS2Q5ST30 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
VARS2Q5ST30 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
VARS2Q5ST30 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
VARS2Q5ST30 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
VARS2Q5ST30 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 HDAC1P2-201ENST00000453661 1398 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
VARS2Q5ST30 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VARS2Q5ST30 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARS2Q5ST30 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARS2Q5ST30 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARS2Q5ST30 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 OR52E6-202ENST00000379946 954 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 RNU6-128P-201ENST00000383976 107 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 HMGB1P20-201ENST00000402555 677 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 PRRC2CP1-201ENST00000404428 159 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 RN7SKP148-201ENST00000410179 275 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 RN7SKP51-201ENST00000410781 304 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARS2Q5ST30 UQCRHP1-204ENST00000424609 274 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 AC096632.1-201ENST00000427395 310 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 GAPDHP48-201ENST00000436626 961 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 RPEP4-201ENST00000437636 602 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 SUMO2P3-201ENST00000438311 288 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 AC016724.1-201ENST00000453215 421 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 RN7SL655P-201ENST00000486087 298 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 RPL3P13-201ENST00000550415 216 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 AL390123.1-201ENST00000603216 237 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 AL355333.1-201ENST00000605632 279 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 AL512624.1-201ENST00000613638 469 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 AC073488.2-201ENST00000631903 751 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 U6.106-201ENST00000636360 105 ntBASIC7.57□□□□□ -1.2
VARS2Q5ST30 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VARS2Q5ST30 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VARS2Q5ST30 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARS2Q5ST30 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARS2Q5ST30 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
VARS2Q5ST30 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARS2Q5ST30 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
VARS2Q5ST30 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
VARS2Q5ST30 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms