Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC8.85□□□□□ -0.99
HOXD11P31277 AP000350.7-201ENST00000624923 8030 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
HOXD11P31277 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.84□□□□□ -0.99
HOXD11P31277 CYP2G2P-201ENST00000594920 1485 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC8.84□□□□□ -0.99
HOXD11P31277 KCND1-202ENST00000376477 3306 ntTSL 2 BASIC8.84□□□□□ -0.99
HOXD11P31277 OPTN-204ENST00000378752 3488 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC8.84□□□□□ -0.99
HOXD11P31277 SPECC1-201ENST00000261503 3948 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 AC073539.1-201ENST00000599810 2094 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 MAPK10-233ENST00000515650 2394 ntTSL 5 BASIC8.84□□□□□ -0.99
HOXD11P31277 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC8.84□□□□□ -0.99
HOXD11P31277 SEMA3E-201ENST00000307792 6476 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC8.84□□□□□ -0.99
HOXD11P31277 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 RN7SKP184-201ENST00000362348 333 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 Y_RNA.120-201ENST00000363304 110 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 RNY3P5-201ENST00000384127 102 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 RNU6-729P-201ENST00000384399 107 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 Y_RNA.544-201ENST00000384650 113 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 Y_RNA.617-201ENST00000410920 90 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 TMSB10P1-201ENST00000415070 132 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC8.84□□□□□ -0.99
HOXD11P31277 AL627311.1-201ENST00000431514 115 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC8.84□□□□□ -0.99
HOXD11P31277 AC006028.1-201ENST00000438379 402 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 AC018638.4-201ENST00000465971 1150 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 RPS26P45-201ENST00000471748 340 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 RN7SL643P-201ENST00000471845 291 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 OR2AO1P-201ENST00000476497 403 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 OR2A20P-201ENST00000479887 2913 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 GMPSP1-201ENST00000514075 579 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC8.84□□□□□ -0.99
HOXD11P31277 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC8.84□□□□□ -0.99
HOXD11P31277 AC018448.1-201ENST00000552843 316 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC8.84□□□□□ -0.99
HOXD11P31277 C5orf66-205ENST00000555438 3246 ntTSL 3 BASIC8.84□□□□□ -0.99
HOXD11P31277 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC8.84□□□□□ -0.99
HOXD11P31277 uc_338.2-201ENST00000612963 182 ntBASIC8.84□□□□□ -0.99
HOXD11P31277 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
HOXD11P31277 ESR1-206ENST00000427531 5436 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 SEMA6A-212ENST00000513137 3640 ntTSL 2 BASIC8.84□□□□□ -0.99
HOXD11P31277 MSS51-201ENST00000299432 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 TMEM242-202ENST00000400788 4043 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 MYT1L-202ENST00000399161 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 ZNF195-204ENST00000354599 2970 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 MEIS2-203ENST00000340545 3056 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 ZRANB2-202ENST00000370920 3078 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
HOXD11P31277 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
HOXD11P31277 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
HOXD11P31277 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
HOXD11P31277 EXO1-202ENST00000366548 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -1
HOXD11P31277 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC8.83□□□□□ -1
HOXD11P31277 AC010329.5-201ENST00000623497 2174 ntBASIC8.83□□□□□ -1
HOXD11P31277 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC8.83□□□□□ -1
HOXD11P31277 MLLT3-209ENST00000629733 3264 ntTSL 5 BASIC8.83□□□□□ -1
HOXD11P31277 FLJ36000-201ENST00000612344 3801 ntTSL 1 (best) BASIC8.83□□□□□ -1
HOXD11P31277 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HOXD11P31277 AL136140.2-201ENST00000624717 1705 ntBASIC8.83□□□□□ -1
HOXD11P31277 KIF9-202ENST00000335044 3357 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HOXD11P31277 HCAR3-201ENST00000528880 2137 ntAPPRIS P1 BASIC8.83□□□□□ -1
HOXD11P31277 VPS11-208ENST00000621676 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HOXD11P31277 MAPK10-386ENST00000642038 2354 ntBASIC8.83□□□□□ -1
HOXD11P31277 ZNF615-215ENST00000618487 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
HOXD11P31277 GTF3C2-202ENST00000359541 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HOXD11P31277 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC8.83□□□□□ -1
HOXD11P31277 U3.1-201ENST00000362500 215 ntBASIC8.83□□□□□ -1
HOXD11P31277 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC8.83□□□□□ -1
HOXD11P31277 SNORA26.5-201ENST00000391215 123 ntBASIC8.83□□□□□ -1
HOXD11P31277 MSRB1P1-201ENST00000396851 354 ntBASIC8.83□□□□□ -1
HOXD11P31277 MIR888-201ENST00000401186 77 ntBASIC8.83□□□□□ -1
HOXD11P31277 AL023773.2-201ENST00000412173 1005 ntBASIC8.83□□□□□ -1
HOXD11P31277 YPEL5P1-201ENST00000419731 367 ntBASIC8.83□□□□□ -1
HOXD11P31277 AC073261.1-201ENST00000429409 121 ntBASIC8.83□□□□□ -1
HOXD11P31277 GSTM5P1-201ENST00000434751 660 ntBASIC8.83□□□□□ -1
HOXD11P31277 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC8.83□□□□□ -1
HOXD11P31277 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC8.83□□□□□ -1
HOXD11P31277 RPL23AP53-201ENST00000521854 457 ntBASIC8.83□□□□□ -1
HOXD11P31277 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC8.83□□□□□ -1
HOXD11P31277 VN1R85P-201ENST00000601587 426 ntBASIC8.83□□□□□ -1
HOXD11P31277 AL355812.1-201ENST00000603215 216 ntBASIC8.83□□□□□ -1
HOXD11P31277 AC010999.1-201ENST00000611856 324 ntBASIC8.83□□□□□ -1
HOXD11P31277 AC024581.2-201ENST00000619986 252 ntBASIC8.83□□□□□ -1
HOXD11P31277 AL360181.4-201ENST00000621752 134 ntBASIC8.83□□□□□ -1
HOXD11P31277 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC8.83□□□□□ -1
HOXD11P31277 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC8.83□□□□□ -1
HOXD11P31277 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC8.83□□□□□ -1
HOXD11P31277 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC8.83□□□□□ -1
HOXD11P31277 AC083805.1-201ENST00000499481 3507 ntTSL 1 (best) BASIC8.83□□□□□ -1
HOXD11P31277 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
HOXD11P31277 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC8.83□□□□□ -1
HOXD11P31277 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
HOXD11P31277 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
HOXD11P31277 SLC24A1-201ENST00000261892 5768 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
HOXD11P31277 EGF-206ENST00000509793 4489 ntTSL 2 BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 303.7 ms