Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC053481.3-201ENST00000577881 843 ntBASIC3.69□□□□□ -1.82
CCDC88CQ9P219 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 AC133552.5-201ENST00000604266 540 ntBASIC3.69□□□□□ -1.82
CCDC88CQ9P219 AP003392.5-201ENST00000607857 415 ntBASIC3.69□□□□□ -1.82
CCDC88CQ9P219 AC015967.1-201ENST00000619893 476 ntBASIC3.69□□□□□ -1.82
CCDC88CQ9P219 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC88CQ9P219 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AL627171.1-201ENST00000618845 1308 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AL121834.1-202ENST00000404494 277 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 JKAMPP1-201ENST00000413804 919 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 NOTCH2P1-201ENST00000443481 624 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 RPS3AP46-201ENST00000448352 682 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 TRAV15-201ENST00000556680 249 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 MIR486-1-201ENST00000612171 68 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AC006840.1-201ENST00000623069 542 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AC124312.6-202ENST00000623624 418 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 BDP1P-201ENST00000582658 1990 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AP002001.2-201ENST00000529025 1469 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AC007390.2-201ENST00000606229 3803 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 RNU6ATAC-201ENST00000408749 126 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 RAB9AP3-201ENST00000412737 573 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 TPTE2P3-201ENST00000441562 1189 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 RAB9AP1-201ENST00000449393 573 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AC098824.1-201ENST00000453565 980 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 UBDP1-202ENST00000457888 382 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AC008126.1-201ENST00000549019 480 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AC017100.2-201ENST00000584628 355 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AL133247.2-201ENST00000603236 482 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 AP001005.3-201ENST00000622049 129 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 CDY3P-201ENST00000454543 1618 ntBASIC3.68□□□□□ -1.82
CCDC88CQ9P219 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 OR52B1P-201ENST00000316506 909 ntBASIC3.67□□□□□ -1.82
CCDC88CQ9P219 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 AC073136.2-201ENST00000417282 849 ntBASIC3.67□□□□□ -1.82
CCDC88CQ9P219 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 IGKV2-38-201ENST00000517443 247 ntBASIC3.67□□□□□ -1.82
CCDC88CQ9P219 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 SULT1C2P2-201ENST00000562517 294 ntBASIC3.67□□□□□ -1.82
CCDC88CQ9P219 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 EIF1P6-201ENST00000600054 334 ntBASIC3.67□□□□□ -1.82
CCDC88CQ9P219 MRPS35P3-201ENST00000603189 709 ntBASIC3.67□□□□□ -1.82
CCDC88CQ9P219 AC067931.1-201ENST00000624190 671 ntBASIC3.67□□□□□ -1.82
CCDC88CQ9P219 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 NR1H5P-201ENST00000452683 1377 ntBASIC3.67□□□□□ -1.82
CCDC88CQ9P219 DDX18P6-201ENST00000450119 1997 ntBASIC3.67□□□□□ -1.82
CCDC88CQ9P219 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CCDC88CQ9P219 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC88CQ9P219 SNORA73.2-201ENST00000364946 201 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 U1.1-201ENST00000384101 164 ntBASIC3.66□□□□□ -1.82
CCDC88CQ9P219 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms