Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RPS23P6-201ENST00000466136 431 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 RPL7P38-201ENST00000488396 739 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AF131216.2-201ENST00000512316 564 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 RN7SKP13-201ENST00000515933 244 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 RNU6-264P-201ENST00000517134 104 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AL049870.4-201ENST00000555741 486 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AC007225.2-201ENST00000562529 256 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AC022916.3-201ENST00000592961 742 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AC007687.1-201ENST00000602704 304 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AC136443.5-201ENST00000603741 370 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 BNIP3P4-201ENST00000604946 565 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AC104695.2-201ENST00000605056 775 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AL132822.1-201ENST00000617063 513 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AC134503.1-201ENST00000633048 54 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 AL031985.3-201ENST00000565390 2449 ntBASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SHKBP1Q8TBC3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC025750.1-201ENST00000399891 379 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 MIR548P-201ENST00000408336 84 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 RNA5SP118-201ENST00000410385 109 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 RN7SKP29-201ENST00000410957 272 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 BX295541.1-201ENST00000417774 250 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 RPS4XP5-201ENST00000419038 768 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 MTCO3P21-201ENST00000430791 643 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 SDC4P-201ENST00000453285 601 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC130509.1-201ENST00000464158 433 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 RN7SL352P-201ENST00000466002 277 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC114981.1-201ENST00000503897 678 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC104108.1-201ENST00000509930 412 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 SNORA19.2-201ENST00000516013 114 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC083923.1-201ENST00000523708 376 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC239860.2-201ENST00000525886 270 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AL390334.1-201ENST00000556395 450 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 MIR3171-201ENST00000584270 74 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC018638.8-201ENST00000588755 281 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 VN1R107P-201ENST00000601784 209 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AL589674.2-201ENST00000604304 337 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 RNU6-88P-201ENST00000606801 100 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC090425.1-201ENST00000610007 140 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 RN7SL544P-201ENST00000617232 284 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AL355974.3-201ENST00000617383 467 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 RN7SL763P-201ENST00000620922 284 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC006840.1-201ENST00000623069 542 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC007342.8-201ENST00000623278 678 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 RPL23AP61-201ENST00000623642 466 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC093591.3-201ENST00000634516 308 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 MTND4P14-201ENST00000435799 1354 ntBASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
SHKBP1Q8TBC3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.16□□□□□ -1.42
SHKBP1Q8TBC3 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms