Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNA5SP198-201ENST00000410376 127 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 RNU6-735P-201ENST00000410612 107 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 RNU2-51P-201ENST00000410708 197 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 RNA5SP155-201ENST00000411154 129 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 AC078974.1-201ENST00000411597 223 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 RAC1P3-201ENST00000416129 580 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 RPL7P2-201ENST00000427639 268 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 AL138799.3-201ENST00000438968 350 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 AL353662.1-201ENST00000439099 327 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 RPL23AP64-201ENST00000469465 435 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 RPS29P26-201ENST00000477483 171 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 RPL24-206ENST00000495401 478 ntTSL 2 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 AC138517.1-201ENST00000515724 568 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 RNU6-1038P-201ENST00000516516 104 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 AC012433.1-201ENST00000588916 398 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 MZT1P2-201ENST00000604387 248 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 AL008729.2-201ENST00000606393 473 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 AC083806.2-201ENST00000617795 2685 ntBASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
TRIM35Q9UPQ4 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 GLYATL1P1-201ENST00000528297 1607 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 USP48-203ENST00000374732 3037 ntTSL 2 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 Y_RNA.378-201ENST00000365652 113 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 TINAG-202ENST00000370864 692 ntTSL 2 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 U3.52-201ENST00000384034 216 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 RNU6-903P-201ENST00000391270 109 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 AL391417.1-201ENST00000404100 426 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 GAPDHP34-201ENST00000432112 823 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 COL11A2P1-205ENST00000441798 676 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 AC133473.1-201ENST00000455173 299 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 RN7SL836P-201ENST00000476140 296 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 Y_RNA.654-201ENST00000497848 106 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 AC092375.1-201ENST00000550410 637 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 HSBP1P1-201ENST00000555205 166 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 OR4H6P-201ENST00000563771 921 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 MIR5186-201ENST00000577504 120 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 MIR3157-201ENST00000578688 85 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 AC006254.3-201ENST00000603353 884 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 AC104662.1-201ENST00000604448 511 ntBASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
TRIM35Q9UPQ4 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
TRIM35Q9UPQ4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
TRIM35Q9UPQ4 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
TRIM35Q9UPQ4 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC8.71□□□□□ -1.01
TRIM35Q9UPQ4 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
TRIM35Q9UPQ4 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
TRIM35Q9UPQ4 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC8.71□□□□□ -1.01
TRIM35Q9UPQ4 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
TRIM35Q9UPQ4 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
TRIM35Q9UPQ4 AL157831.2-201ENST00000564681 3095 ntBASIC8.71□□□□□ -1.01
TRIM35Q9UPQ4 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
TRIM35Q9UPQ4 Y_RNA.39-201ENST00000362620 98 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 RNU6-212P-201ENST00000362642 104 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 SNORD27-201ENST00000363981 72 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 SNORD116-11-201ENST00000383882 92 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 SNORD94-201ENST00000386037 137 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 AC110754.1-201ENST00000399740 601 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 AL033519.1-201ENST00000407266 307 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 MIR548H3-201ENST00000408771 118 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 RN7SKP296-201ENST00000411185 341 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms