Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 MAPK10-365ENST00000641902 3825 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AL512646.1-201ENST00000269395 1077 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 Y_RNA.212-201ENST00000364177 102 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 RN7SKP130-201ENST00000364924 301 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 RN7SKP269-201ENST00000365545 319 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 Y_RNA.512-201ENST00000384518 102 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 MIR454-201ENST00000390180 115 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 HSFY6P-201ENST00000445573 403 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AC016724.1-201ENST00000453215 421 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 RPL35AP28-201ENST00000459730 331 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AC104109.1-201ENST00000498563 436 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AC079140.5-201ENST00000507882 310 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 SNX18P23-201ENST00000510867 677 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AL591767.3-201ENST00000554632 525 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AC105224.1-201ENST00000587055 421 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AC005858.3-201ENST00000624756 589 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 SNORA16A-202ENST00000628458 135 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AC093278.2-201ENST00000564956 2485 ntBASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SCUBE3Q8IX30 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 AC121333.1-201ENST00000567488 2709 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 AL158163.1-201ENST00000603915 1649 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 RNU6-1252P-201ENST00000363054 104 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 Y_RNA.288-201ENST00000364854 92 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 Y_RNA.396-201ENST00000383949 103 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 CYCSP17-201ENST00000407870 315 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 RSL24D1P6-201ENST00000426934 401 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 AC022080.2-201ENST00000452932 533 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 AC002553.2-201ENST00000453217 340 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 RNU7-27P-201ENST00000459281 62 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 RN7SL216P-201ENST00000471607 298 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 RN7SL654P-201ENST00000479178 292 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 RNU4ATAC7P-201ENST00000516280 125 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 IGKV2D-38-201ENST00000518423 240 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 COX6B1P6-201ENST00000522347 255 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 AP003497.1-201ENST00000528472 562 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 AC140063.1-201ENST00000541343 259 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 DPPA3P2-201ENST00000553589 478 ntBASIC7.17□□□□□ -1.26
SCUBE3Q8IX30 MIR4312-201ENST00000579909 76 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms