Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 RPS26P56-201ENST00000444468 240 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 RPL7P59-201ENST00000447700 943 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 TPT1P13-201ENST00000449760 499 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AURKAPS1-201ENST00000451805 1212 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 RPL21P18-201ENST00000469899 480 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC058823.1-201ENST00000485315 474 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC093270.2-201ENST00000486157 792 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC016550.1-201ENST00000505348 785 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 MTND1P36-201ENST00000522384 936 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC005868.1-201ENST00000536421 331 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 TOMM20P2-201ENST00000540082 421 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 PCNPP1-201ENST00000552501 511 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC011447.4-201ENST00000587562 111 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC069307.1-201ENST00000602820 447 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC008814.1-201ENST00000603797 406 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC135068.12-201ENST00000637370 931 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 AC138649.5-201ENST00000637456 137 ntBASIC4.27□□□□□ -1.73
C11orf88Q6PI97 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
C11orf88Q6PI97 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AL122126.1-201ENST00000546905 1318 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 RNU1-94P-201ENST00000362627 173 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 U8.4-201ENST00000363626 134 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 RNU6-353P-201ENST00000364266 108 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AL355615.1-201ENST00000406187 641 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 U3.36-201ENST00000408418 213 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 RN7SKP273-201ENST00000411392 314 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 OR51A3P-201ENST00000413596 924 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 RPL35AP24-201ENST00000413846 330 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC008280.1-201ENST00000418851 412 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC005517.2-201ENST00000424673 553 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 CKS1BP6-201ENST00000424932 240 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AP000949.1-201ENST00000438328 629 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC245047.2-201ENST00000441060 530 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC073648.4-201ENST00000442655 781 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC073850.1-201ENST00000449243 255 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AL035090.1-201ENST00000454835 332 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 RPL7P32-201ENST00000457119 744 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 RPS4XP1-201ENST00000482189 787 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 NCOR1P1-202ENST00000486162 291 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC092902.1-201ENST00000486999 259 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC021146.3-201ENST00000511911 260 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AP003355.1-201ENST00000518956 587 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AP001207.1-201ENST00000524051 481 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 OR5BC1P-201ENST00000529327 739 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 GSTP1P1-201ENST00000548078 319 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 OR4G1P-201ENST00000588632 938 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC133794.1-201ENST00000602731 914 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC087763.1-201ENST00000603391 286 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AP004247.3-201ENST00000608682 624 ntBASIC4.26□□□□□ -1.73
C11orf88Q6PI97 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.26□□□□□ -1.73
C11orf88Q6PI97 uc_338.18-201ENST00000615451 175 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms