Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 SRRM1P3-201ENST00000426911 2678 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 RNU6-623P-201ENST00000363143 105 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 RNU6-660P-201ENST00000364566 109 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 MIR143-201ENST00000385300 106 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC005042.1-201ENST00000393397 800 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 ZNF603P-201ENST00000405613 487 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AL133384.1-201ENST00000412744 351 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AL133173.1-201ENST00000423458 397 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AL662874.1-201ENST00000426065 230 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC104843.2-201ENST00000427666 297 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 GAPDHP48-201ENST00000436626 961 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 MTND4P6-201ENST00000438297 472 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 RPL5P25-201ENST00000441148 775 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 RPL23AP16-201ENST00000441715 421 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 snoU13.7-201ENST00000459220 104 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC090013.1-201ENST00000485147 480 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC068724.1-201ENST00000487100 792 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 RPL7P51-201ENST00000490532 749 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC090638.1-201ENST00000498296 909 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 RNU6-513P-201ENST00000516104 104 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 RN7SKP99-201ENST00000517028 307 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC122688.1-201ENST00000541494 223 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC022404.1-201ENST00000555320 273 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 MRPS21P7-201ENST00000566937 238 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC103987.3-201ENST00000582071 292 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 RN7SKP299-201ENST00000606679 301 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 RNU6-88P-201ENST00000606801 100 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AL022394.1-201ENST00000606979 292 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 CU639417.4-201ENST00000623928 207 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 LINC00561-201ENST00000565815 2738 ntBASIC4.52□□□□□ -1.69
CCDC144NLQ6NUI1 AC006210.2-201ENST00000367074 1545 ntBASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 AC009962.1-201ENST00000567327 3813 ntBASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 Z93019.1-201ENST00000416450 973 ntBASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 ZNF885P-201ENST00000420174 1098 ntBASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 UBE2FP3-201ENST00000436366 524 ntBASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 CEACAMP9-201ENST00000442990 513 ntBASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.51□□□□□ -1.69
CCDC144NLQ6NUI1 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms