Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PDS5AQ29RF7 AC233280.2-201ENST00000603917 1070 ntBASIC5.05□□□□□ -1.6
PDS5AQ29RF7 AP004372.1-201ENST00000604842 844 ntBASIC5.05□□□□□ -1.6
PDS5AQ29RF7 AL158050.2-201ENST00000605336 568 ntBASIC5.05□□□□□ -1.6
PDS5AQ29RF7 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.05□□□□□ -1.6
PDS5AQ29RF7 AL138721.1-201ENST00000616756 179 ntBASIC5.05□□□□□ -1.6
PDS5AQ29RF7 AL121890.2-201ENST00000617644 465 ntBASIC5.05□□□□□ -1.6
PDS5AQ29RF7 AC019080.5-201ENST00000624891 757 ntBASIC5.05□□□□□ -1.6
PDS5AQ29RF7 AL445984.1-201ENST00000637834 659 ntBASIC5.05□□□□□ -1.6
PDS5AQ29RF7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDS5AQ29RF7 AC116667.1-201ENST00000604855 2072 ntBASIC5.05□□□□□ -1.6
PDS5AQ29RF7 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.05□□□□□ -1.6
PDS5AQ29RF7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PDS5AQ29RF7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PDS5AQ29RF7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 USP9YP4-201ENST00000424401 1745 ntBASIC5.04□□□□□ -1.6
PDS5AQ29RF7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 OR11H4-201ENST00000315409 1082 ntBASIC5.04□□□□□ -1.6
PDS5AQ29RF7 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 AL117339.2-201ENST00000430475 180 ntBASIC5.04□□□□□ -1.6
PDS5AQ29RF7 MTCYBP21-201ENST00000443300 1113 ntBASIC5.04□□□□□ -1.6
PDS5AQ29RF7 AL627224.1-201ENST00000448334 444 ntBASIC5.04□□□□□ -1.6
PDS5AQ29RF7 RPL36AP13-201ENST00000457490 317 ntBASIC5.04□□□□□ -1.6
PDS5AQ29RF7 RNU6-334P-201ENST00000517072 102 ntBASIC5.04□□□□□ -1.6
PDS5AQ29RF7 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.04□□□□□ -1.6
PDS5AQ29RF7 NOP56P3-201ENST00000549457 385 ntBASIC5.04□□□□□ -1.6
PDS5AQ29RF7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 MTCO3P22-201ENST00000603219 784 ntBASIC5.04□□□□□ -1.6
PDS5AQ29RF7 AC096947.1-201ENST00000603233 470 ntBASIC5.04□□□□□ -1.6
PDS5AQ29RF7 RNU6-84P-201ENST00000607737 102 ntBASIC5.04□□□□□ -1.6
PDS5AQ29RF7 AC005021.1-201ENST00000608730 355 ntBASIC5.04□□□□□ -1.6
PDS5AQ29RF7 AC090912.3-201ENST00000609775 533 ntBASIC5.04□□□□□ -1.6
PDS5AQ29RF7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PDS5AQ29RF7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 RNA5SP388-201ENST00000362584 119 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 SNORD65-201ENST00000391079 73 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 HDGFP1-201ENST00000405943 252 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 RNA5SP146-201ENST00000410743 123 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 RN7SKP247-201ENST00000411094 308 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 ARAFP2-201ENST00000440565 559 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 RPL7P1-201ENST00000468161 747 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 RPL7P9-201ENST00000468715 747 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 AF213884.1-201ENST00000488102 463 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 RFPL4AP3-201ENST00000515267 345 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 AC008694.2-201ENST00000517591 306 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 AC100770.1-201ENST00000532310 322 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 RMST_5.1-201ENST00000618704 126 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 AP003485.1-201ENST00000625093 753 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 IQCB2P-201ENST00000401788 1633 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 AC092435.4-201ENST00000623012 4159 ntBASIC5.03□□□□□ -1.6
PDS5AQ29RF7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PDS5AQ29RF7 ERCC6-202ENST00000374127 1782 ntBASIC5.03□□□□□ -1.61
PDS5AQ29RF7 AC010300.1-201ENST00000600671 5134 ntBASIC5.02□□□□□ -1.61
PDS5AQ29RF7 RLIMP1-201ENST00000339626 1680 ntBASIC5.02□□□□□ -1.61
PDS5AQ29RF7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDS5AQ29RF7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDS5AQ29RF7 BMS1P3-201ENST00000372011 932 ntBASIC5.02□□□□□ -1.61
PDS5AQ29RF7 RNU6-1000P-201ENST00000391066 106 ntBASIC5.02□□□□□ -1.61
PDS5AQ29RF7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
PDS5AQ29RF7 RPL21P65-201ENST00000406094 466 ntBASIC5.02□□□□□ -1.61
PDS5AQ29RF7 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDS5AQ29RF7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.02□□□□□ -1.61
PDS5AQ29RF7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.02□□□□□ -1.61
PDS5AQ29RF7 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PDS5AQ29RF7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.02□□□□□ -1.61
PDS5AQ29RF7 AL158073.1-201ENST00000426848 1104 ntBASIC5.02□□□□□ -1.61
PDS5AQ29RF7 KCTD10P1-201ENST00000434203 625 ntBASIC5.02□□□□□ -1.61
PDS5AQ29RF7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.02□□□□□ -1.61
PDS5AQ29RF7 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms