Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC005344.1-201ENST00000613391 459 ntBASIC4.61□□□□□ -1.67
HMGCS2P54868 AC003001.2-201ENST00000616294 831 ntBASIC4.61□□□□□ -1.67
HMGCS2P54868 MIR7702-201ENST00000621931 59 ntBASIC4.61□□□□□ -1.67
HMGCS2P54868 CFTRP2-201ENST00000634304 199 ntBASIC4.61□□□□□ -1.67
HMGCS2P54868 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGCS2P54868 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
HMGCS2P54868 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGCS2P54868 AP004289.2-201ENST00000444413 1457 ntBASIC4.61□□□□□ -1.67
HMGCS2P54868 AP002001.2-201ENST00000529025 1469 ntBASIC4.61□□□□□ -1.67
HMGCS2P54868 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGCS2P54868 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HMGCS2P54868 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCS2P54868 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS2P54868 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCS2P54868 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS2P54868 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS2P54868 PCAT14-202ENST00000627127 3935 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGCS2P54868 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS2P54868 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
HMGCS2P54868 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS2P54868 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.6□□□□□ -1.67
HMGCS2P54868 RNA5SP97-201ENST00000365006 84 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 RPL21P17-201ENST00000397467 475 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HMGCS2P54868 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS2P54868 AC233289.1-201ENST00000403700 508 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 MIR1271-201ENST00000408537 86 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 SNORA3.3-201ENST00000408712 125 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 RNA5SP296-201ENST00000410523 111 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 RNU6-564P-201ENST00000410983 104 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 AC068533.1-201ENST00000418542 415 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 MTND2P15-201ENST00000418575 892 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS2P54868 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGCS2P54868 AL591623.2-201ENST00000449978 222 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 AL513343.1-201ENST00000451818 792 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 PRSS3P4-201ENST00000453323 162 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCS2P54868 CYCSP53-201ENST00000455540 265 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 TPRKBP1-201ENST00000456243 481 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 CDH12P2-201ENST00000504393 298 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.6□□□□□ -1.67
HMGCS2P54868 SCARNA14-201ENST00000516903 136 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.6□□□□□ -1.67
HMGCS2P54868 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCS2P54868 CD24P2-201ENST00000565486 219 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCS2P54868 MIR4472-2-201ENST00000582069 67 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.6□□□□□ -1.67
HMGCS2P54868 AC022387.2-201ENST00000604050 448 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCS2P54868 AC022106.2-201ENST00000620114 757 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS2P54868 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS2P54868 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS2P54868 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS2P54868 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS2P54868 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.6□□□□□ -1.67
HMGCS2P54868 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS2P54868 AC092435.4-201ENST00000623012 4159 ntBASIC4.6□□□□□ -1.67
HMGCS2P54868 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS2P54868 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.59□□□□□ -1.67
HMGCS2P54868 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCS2P54868 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCS2P54868 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCS2P54868 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCS2P54868 RN7SKP74-201ENST00000362849 309 ntBASIC4.59□□□□□ -1.67
HMGCS2P54868 RNA5SP105-201ENST00000391123 113 ntBASIC4.59□□□□□ -1.67
HMGCS2P54868 Z95327.2-201ENST00000414579 1873 ntBASIC4.59□□□□□ -1.67
HMGCS2P54868 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCS2P54868 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGCS2P54868 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
HMGCS2P54868 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGCS2P54868 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGCS2P54868 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCS2P54868 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCS2P54868 FABP3P2-201ENST00000453169 399 ntBASIC4.59□□□□□ -1.67
HMGCS2P54868 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCS2P54868 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGCS2P54868 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.59□□□□□ -1.67
HMGCS2P54868 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMGCS2P54868 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.59□□□□□ -1.67
HMGCS2P54868 SNRPGP1-201ENST00000553864 222 ntBASIC4.59□□□□□ -1.67
HMGCS2P54868 RPL21P7-201ENST00000557463 483 ntBASIC4.59□□□□□ -1.67
HMGCS2P54868 RN7SL339P-201ENST00000580597 296 ntBASIC4.59□□□□□ -1.67
HMGCS2P54868 AC017100.2-201ENST00000584628 355 ntBASIC4.59□□□□□ -1.67
HMGCS2P54868 AC006272.2-201ENST00000594725 163 ntBASIC4.59□□□□□ -1.67
HMGCS2P54868 AL161756.2-201ENST00000604597 246 ntBASIC4.59□□□□□ -1.67
HMGCS2P54868 AL391497.1-201ENST00000608671 547 ntBASIC4.59□□□□□ -1.67
HMGCS2P54868 AC004241.3-201ENST00000611728 517 ntBASIC4.59□□□□□ -1.67
HMGCS2P54868 AL391261.4-201ENST00000616012 481 ntBASIC4.59□□□□□ -1.67
HMGCS2P54868 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HMGCS2P54868 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.68
HMGCS2P54868 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMGCS2P54868 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
HMGCS2P54868 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGCS2P54868 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HMGCS2P54868 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.58□□□□□ -1.68
HMGCS2P54868 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms