Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 AC147055.3-201ENST00000510547 851 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 AC026726.1-201ENST00000512859 601 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 IGKV3D-34-201ENST00000522638 302 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 OR7E10P-201ENST00000526420 991 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 OR4A2P-201ENST00000527276 913 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 OR4U1P-201ENST00000554958 912 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 AC012146.2-201ENST00000576545 416 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 MIR3176-201ENST00000582210 90 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 AC009303.3-201ENST00000591103 736 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 AL354984.3-201ENST00000604803 325 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 RNVU1-4-201ENST00000612985 164 ntBASIC3.56□□□□□ -1.84
HLA-DMAP28067 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DMAP28067 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DMAP28067 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DMAP28067 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DMAP28067 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HLA-DMAP28067 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.56□□□□□ -1.84
HLA-DMAP28067 ASNSP1-204ENST00000641977 1664 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DMAP28067 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DMAP28067 AC008033.1-201ENST00000216407 1162 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DMAP28067 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DMAP28067 RN7SKP106-201ENST00000410832 272 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 MTND4P11-201ENST00000417020 1058 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 RPS26P13-201ENST00000419030 330 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 RPL21P109-201ENST00000422213 475 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 AL392003.1-201ENST00000434394 243 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 KCTD9P3-201ENST00000434597 1169 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 EIF4EBP2P1-201ENST00000450009 343 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 DNAJC19P1-201ENST00000455312 319 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 AC053481.1-201ENST00000467217 306 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 RPL21P103-201ENST00000479921 488 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 AC106872.4-201ENST00000510050 523 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 IGKV1-32-201ENST00000519290 311 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 AC092747.2-201ENST00000545069 983 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 AC084033.1-201ENST00000550830 633 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 AP001160.4-201ENST00000596971 382 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 AC007687.1-201ENST00000602704 304 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 AC138473.1-201ENST00000605717 526 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 AC105429.2-201ENST00000610567 517 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 AC008121.2-201ENST00000614647 523 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 C4BPAP1-201ENST00000415474 1893 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DMAP28067 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DMAP28067 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.55□□□□□ -1.84
HLA-DMAP28067 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HLA-DMAP28067 SDAD1P1-202ENST00000524156 2051 ntBASIC3.55□□□□□ -1.84
HLA-DMAP28067 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DMAP28067 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 SYT14P1-202ENST00000600441 1448 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DMAP28067 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DMAP28067 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DMAP28067 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 RNA5SP397-201ENST00000391323 118 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 CCNB2P1-201ENST00000399411 1150 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 RN7SKP285-201ENST00000410137 318 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DMAP28067 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC002075.2-201ENST00000425207 252 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC017083.1-201ENST00000428093 483 ntBASIC3.54□□□□□ -1.84
HLA-DMAP28067 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.54□□□□□ -1.84
HLA-DMAP28067 AC245517.2-201ENST00000442890 346 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms