Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXD8P13378 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
HOXD8P13378 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXD8P13378 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXD8P13378 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXD8P13378 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXD8P13378 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXD8P13378 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXD8P13378 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXD8P13378 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HOXD8P13378 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXD8P13378 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXD8P13378 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXD8P13378 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HOXD8P13378 Y_RNA.419-201ENST00000384041 102 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 Y_RNA.431-201ENST00000384086 102 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXD8P13378 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXD8P13378 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.53□□□□□ -1.36
HOXD8P13378 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXD8P13378 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXD8P13378 AC109583.1-201ENST00000432156 268 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 RPL7P54-201ENST00000438336 674 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 RPL23AP16-201ENST00000441715 421 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 RNU7-27P-201ENST00000459281 62 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 AC007537.2-201ENST00000472093 511 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 AC009120.1-201ENST00000493458 473 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXD8P13378 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HOXD8P13378 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXD8P13378 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HOXD8P13378 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.53□□□□□ -1.36
HOXD8P13378 SNORA43.3-201ENST00000517240 103 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 MRPS16P1-201ENST00000523462 412 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 GTF2IP11-201ENST00000526931 420 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 HMGB1P42-201ENST00000532126 553 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 AP003034.1-201ENST00000534621 422 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXD8P13378 DPPA3P2-202ENST00000557188 1219 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXD8P13378 AC090651.1-201ENST00000567865 634 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 MIR1273E-201ENST00000581165 102 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXD8P13378 OR7E18P-201ENST00000592589 702 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 AC007621.1-201ENST00000604544 437 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXD8P13378 AC093788.1-201ENST00000609356 927 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 AL132765.2-201ENST00000610812 351 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.53□□□□□ -1.36
HOXD8P13378 AL158801.5-201ENST00000623123 465 ntBASIC6.53□□□□□ -1.36
HOXD8P13378 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXD8P13378 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HOXD8P13378 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HOXD8P13378 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
HOXD8P13378 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXD8P13378 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HOXD8P13378 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXD8P13378 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.53□□□□□ -1.36
HOXD8P13378 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXD8P13378 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXD8P13378 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HOXD8P13378 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.53□□□□□ -1.36
HOXD8P13378 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
HOXD8P13378 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXD8P13378 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXD8P13378 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HOXD8P13378 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
HOXD8P13378 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXD8P13378 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
HOXD8P13378 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXD8P13378 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXD8P13378 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXD8P13378 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HOXD8P13378 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXD8P13378 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXD8P13378 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXD8P13378 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
HOXD8P13378 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXD8P13378 U8.3-201ENST00000363321 132 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HOXD8P13378 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXD8P13378 MIR937-201ENST00000401271 86 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 RNA5SP118-201ENST00000410385 109 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXD8P13378 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXD8P13378 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXD8P13378 AC007568.1-201ENST00000422912 471 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 SDCBPP2-201ENST00000424643 885 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 AL353729.1-201ENST00000425044 720 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 AL365400.1-201ENST00000431854 640 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 HMGB3P24-201ENST00000433260 622 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 CACYBPP1-201ENST00000438592 684 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 AL663074.2-201ENST00000440621 479 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 TXNP5-201ENST00000441043 315 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXD8P13378 RPL23AP20-201ENST00000447965 421 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 AL162739.1-201ENST00000450606 307 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 RPL38P3-201ENST00000484463 213 ntBASIC6.52□□□□□ -1.37
HOXD8P13378 RN7SL629P-201ENST00000489622 285 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms