Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
APOBP04114 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.3□□□□□ -2.04
APOBP04114 AC113192.3-201ENST00000529152 742 ntBASIC2.3□□□□□ -2.04
APOBP04114 AC026422.1-201ENST00000623961 452 ntBASIC2.3□□□□□ -2.04
APOBP04114 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC2.3□□□□□ -2.04
APOBP04114 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC2.3□□□□□ -2.04
APOBP04114 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.3□□□□□ -2.04
APOBP04114 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
APOBP04114 PHACTR2P1-201ENST00000605639 1414 ntBASIC2.3□□□□□ -2.04
APOBP04114 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC2.3□□□□□ -2.04
APOBP04114 AL358178.1-201ENST00000407698 397 ntBASIC2.3□□□□□ -2.04
APOBP04114 DBIP2-201ENST00000419076 262 ntBASIC2.3□□□□□ -2.04
APOBP04114 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.3□□□□□ -2.04
APOBP04114 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC2.3□□□□□ -2.04
APOBP04114 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC2.3□□□□□ -2.04
APOBP04114 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC2.3□□□□□ -2.04
APOBP04114 AC073522.1-201ENST00000483312 377 ntBASIC2.3□□□□□ -2.04
APOBP04114 AC025554.1-201ENST00000505641 188 ntBASIC2.3□□□□□ -2.04
APOBP04114 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.3□□□□□ -2.04
APOBP04114 AC008885.1-201ENST00000514930 301 ntBASIC2.3□□□□□ -2.04
APOBP04114 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.3□□□□□ -2.04
APOBP04114 AL139089.1-201ENST00000620372 975 ntBASIC2.3□□□□□ -2.04
APOBP04114 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC2.3□□□□□ -2.04
APOBP04114 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
APOBP04114 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOBP04114 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC2.29□□□□□ -2.04
APOBP04114 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC2.29□□□□□ -2.04
APOBP04114 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 RNU6-729P-201ENST00000384399 107 ntBASIC2.29□□□□□ -2.04
APOBP04114 RPS23P10-201ENST00000416185 486 ntBASIC2.29□□□□□ -2.04
APOBP04114 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.29□□□□□ -2.04
APOBP04114 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.29□□□□□ -2.04
APOBP04114 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.29□□□□□ -2.04
APOBP04114 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC2.29□□□□□ -2.04
APOBP04114 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.29□□□□□ -2.04
APOBP04114 RPL21P7-201ENST00000557463 483 ntBASIC2.29□□□□□ -2.04
APOBP04114 RNVU1-4-201ENST00000612985 164 ntBASIC2.29□□□□□ -2.04
APOBP04114 AP000542.2-201ENST00000623199 6179 ntBASIC2.29□□□□□ -2.04
APOBP04114 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
APOBP04114 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
APOBP04114 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
APOBP04114 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
APOBP04114 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
APOBP04114 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
APOBP04114 RNU4-35P-201ENST00000362588 141 ntBASIC2.29□□□□□ -2.04
APOBP04114 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.29□□□□□ -2.04
APOBP04114 AC011742.1-201ENST00000431448 434 ntBASIC2.29□□□□□ -2.04
APOBP04114 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.29□□□□□ -2.04
APOBP04114 FABP3P2-201ENST00000453169 399 ntBASIC2.29□□□□□ -2.04
APOBP04114 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC2.29□□□□□ -2.04
APOBP04114 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
APOBP04114 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.29□□□□□ -2.04
APOBP04114 IGHV3-32-201ENST00000519182 355 ntBASIC2.29□□□□□ -2.04
APOBP04114 AC018442.3-201ENST00000523025 183 ntBASIC2.29□□□□□ -2.04
APOBP04114 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.29□□□□□ -2.04
APOBP04114 AC084036.1-201ENST00000609190 508 ntBASIC2.29□□□□□ -2.04
APOBP04114 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC2.29□□□□□ -2.04
APOBP04114 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC2.29□□□□□ -2.04
APOBP04114 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC2.29□□□□□ -2.04
APOBP04114 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC2.29□□□□□ -2.04
APOBP04114 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
APOBP04114 NAMPTP1-201ENST00000440465 2514 ntBASIC2.29□□□□□ -2.04
APOBP04114 UBA52P6-201ENST00000399822 382 ntBASIC2.29□□□□□ -2.04
APOBP04114 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC2.29□□□□□ -2.04
APOBP04114 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.29□□□□□ -2.04
APOBP04114 AC011825.1-201ENST00000484967 388 ntBASIC2.29□□□□□ -2.04
APOBP04114 AC092747.2-201ENST00000545069 983 ntBASIC2.29□□□□□ -2.04
APOBP04114 SMCR2_2.1-201ENST00000619783 161 ntBASIC2.29□□□□□ -2.04
APOBP04114 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.29□□□□□ -2.04
APOBP04114 AL121839.2-201ENST00000565058 6943 ntBASIC2.29□□□□□ -2.04
APOBP04114 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC2.29□□□□□ -2.04
APOBP04114 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
APOBP04114 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
APOBP04114 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.29□□□□□ -2.04
APOBP04114 AC093535.2-201ENST00000624769 2326 ntBASIC2.29□□□□□ -2.04
APOBP04114 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.29□□□□□ -2.04
APOBP04114 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APOBP04114 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms